Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq934 107 4e-18 >seq934 Length=187681 Score = 107 bits (118), Expect = 4e-18 Identities = 154/211 (73%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || || |||||||| || | | ||| | |||||||| | Sbjct 9496 CAAG-TGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCAA 9438 Query 151957 GGCTTTTCCCGGCGAAGAT-AAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 | ||| || |||||||| |||| | |||||||| | | ||| || ||||| || || Sbjct 9437 GCTGTTTACCAGCGAAGATCAAGCGT-TGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 9379 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAGTTT 152073 || || || ||| | || | | || || |||| || || ||||| || |||| Sbjct 9378 ATCTTGGTCTTAACATTGTCGATCGTATCACTGGACTCA--ACCTCGAGAGTGATGGTTT 9321 Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||||||||||||||||| | |||||| Sbjct 9320 TGCCCGTGAGAGTCTTCACGAAAATCTGCAT 9290 Score = 102 bits (112), Expect = 2e-16 Identities = 145/202 (72%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || || || || || ||||| ||||| | | ||| | || || Sbjct 9797 AGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTATAATCAGAGAGAGTCCGGCCGTCC 9738 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||||||||| | | |||||| |||| | ||| |||||||| | Sbjct 9737 TCGAGCTGCTTT--CCGGCGAAGATCAAACGCTGCTGATCCGGAGGGATGCCTTCCTTGT 9680 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| || || ||| || | || | | | || ||| ||| ||||||||||| || | Sbjct 9679 CTTGGATCTTGGTTTTCACGTTATCGATGGTATCCGAAGACTCCACTTCAAGAGTGATGG 9620 Query 152071 TTTTGCCCGTGAGAGTCTTCAC 152092 | || || || |||||||| || Sbjct 9619 TCTTTCCGGTAAGAGTCTTGAC 9598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153780530211804