Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015 -11-03] 2,724 sequences; 32,335,957 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq934 154 4e-32 seq1640 132 1e-25 seq1954 87.8 4e-12 >seq934 Length=187681 Score = 154 bits (170), Expect = 4e-32 Identities = 157/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 177925 AAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACA 177984 |||| | || || ||||| || ||||| || ||||| || || ||||| || || | Sbjct 9590 AAATAGTTGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAAGTGGAGTCTTCGGATA 9649 Query 177985 CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAAC 178044 ||||||| ||||| ||| ||||| || ||||| ||||| ||||||||||| ||||| | Sbjct 9650 CCATCGATAACGTGAAAACCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAGCAGC 9709 Query 178045 GACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCC 178104 | | |||||||||||||| |||||||| || || ||||||| | ||||||||| | | Sbjct 9710 GTTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTCTCTCTGATTATAACATTC 9769 Query 178105 AAAAAGAATCAACACTGCATCTTGT 178129 | || ||||| || || || ||||| Sbjct 9770 AGAAGGAATCCACCCTCCACCTTGT 9794 Score = 147 bits (162), Expect = 5e-30 Identities = 158/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| |||||||| || ||||| ||||| |||||||| || | || Sbjct 9293 CAGATTTTCGTGAAGACTCTCACGGGCAAAACCATCACTCTCGAGGTTGAGTCCAGTGAT 9352 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| |||||||| || || |||||||| ||||||||| Sbjct 9353 ACGATCGACAATGTTAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAGCAA 9412 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || |||||||| |||||||| | ||||| | || || ||| | Sbjct 9413 CGCTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACTCTCTCTGACTACAACATT 9472 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || ||||| || || |||| || Sbjct 9473 CAGAAGGAGTCAACCCTTCA-CTTGGTT 9499 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || | || ||||| || ||||| || || || ||| |||||| Sbjct 9817 CAGATTTTCGTCAAGACCTTGACCGGAAAGACAATCACACTTGAAGTTGAATCTTCAGAC 9876 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| ||| ||| || || ||||| || ||||| || || ||||||||| Sbjct 9877 ACGATCGATAACGTTAAAACAAAAATCCAAGACAAGGAGGGAATTCCACCAGACCAGCAA 9936 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||| || ||||| |||||||| | || || | || || ||| | Sbjct 9937 CGTCTAATTTTCGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAACATT 9996 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || ||||| || Sbjct 9997 CAAAAGGAGTCTACCCTACATCTCGT 10022 >seq1640 Length=153026 Score = 132 bits (146), Expect = 1e-25 Identities = 136/174 (78%), Gaps = 8/174 (5%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACC 177986 ||||| || || ||||| || || || ||||||||||||||||| ||| ||||| Sbjct 9862 TTCGTCAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGAGC---GACACA 9806 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 ||||| || ||||| |||||||||||||| ||||| |||||||| |||||||| || Sbjct 9805 ATCGACAATGTCAAGAGCAAGATTCAGGACAAGGAAGGCATCCCTCCTGACCAGCAGCGT 9746 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAA 178099 | || || |||||||| |||||||| || ||| | || |||| ||||||||| Sbjct 9745 TTGATTTTTGCCGGAAAGCAGCTCGAGGACGGACGCAC-CTTGAGCGATTATAA 9693 >seq1954 Length=527115 Score = 87.8 bits (96), Expect = 4e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || ||||| || ||||||||||| || |||||||| || ||||||||||| Sbjct 282596 GACAAGGAGGGCATCCCCCCTGACCAGCAACGTCTCATCTTCGCTGGCAAACAGCTCGAG 282655 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || || | || ||| | ||||| ||| |||| || || || || || || || || Sbjct 282656 GACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCCACCCTTCACCTCGT 282711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203689188276456