Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysosporium_20queenslandicum_20[genbank_20GCA_5F001430955.1_202015
-11-03] 2,724 sequences; 32,335,957 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq934 154 4e-32
seq1640 132 1e-25
seq1954 87.8 4e-12
>seq934
Length=187681
Score = 154 bits (170), Expect = 4e-32
Identities = 157/205 (77%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 177925 AAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACA 177984
|||| | || || ||||| || ||||| || ||||| || || ||||| || || |
Sbjct 9590 AAATAGTTGTCAAGACTCTTACCGGAAAGACCATCACTCTTGAAGTGGAGTCTTCGGATA 9649
Query 177985 CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAAC 178044
||||||| ||||| ||| ||||| || ||||| ||||| ||||||||||| ||||| |
Sbjct 9650 CCATCGATAACGTGAAAACCAAGATCCAAGACAAGGAAGGCATCCCTCCGGATCAGCAGC 9709
Query 178045 GACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCC 178104
| | |||||||||||||| |||||||| || || ||||||| | ||||||||| | |
Sbjct 9710 GTTTGATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACTCTCTCTGATTATAACATTC 9769
Query 178105 AAAAAGAATCAACACTGCATCTTGT 178129
| || ||||| || || || |||||
Sbjct 9770 AGAAGGAATCCACCCTCCACCTTGT 9794
Score = 147 bits (162), Expect = 5e-30
Identities = 158/208 (76%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| |||||||| || ||||| ||||| |||||||| || | ||
Sbjct 9293 CAGATTTTCGTGAAGACTCTCACGGGCAAAACCATCACTCTCGAGGTTGAGTCCAGTGAT 9352
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||||| |||||||| || || |||||||| |||||||||
Sbjct 9353 ACGATCGACAATGTTAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAGCAA 9412
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || |||||||| |||||||| | ||||| | || || ||| |
Sbjct 9413 CGCTTGATCTTCGCTGGTAAACAGCTTGAAGATGGCCGCACTCTCTCTGACTACAACATT 9472
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || || ||||| || || |||| ||
Sbjct 9473 CAGAAGGAGTCAACCCTTCA-CTTGGTT 9499
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || | || ||||| || ||||| || || || ||| ||||||
Sbjct 9817 CAGATTTTCGTCAAGACCTTGACCGGAAAGACAATCACACTTGAAGTTGAATCTTCAGAC 9876
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| ||| ||| || || ||||| || ||||| || || |||||||||
Sbjct 9877 ACGATCGATAACGTTAAAACAAAAATCCAAGACAAGGAGGGAATTCCACCAGACCAGCAA 9936
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || |||||||| || ||||| |||||||| | || || | || || ||| |
Sbjct 9937 CGTCTAATTTTCGCCGGCAAGCAGCTTGAAGATGGTCGCACACTCTCAGACTACAACATT 9996
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| || || || || ||||| ||
Sbjct 9997 CAAAAGGAGTCTACCCTACATCTCGT 10022
>seq1640
Length=153026
Score = 132 bits (146), Expect = 1e-25
Identities = 136/174 (78%), Gaps = 8/174 (5%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACC 177986
||||| || || ||||| || || || ||||||||||||||||| ||| |||||
Sbjct 9862 TTCGTCAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAGTCGAGC---GACACA 9806
Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046
||||| || ||||| |||||||||||||| ||||| |||||||| |||||||| ||
Sbjct 9805 ATCGACAATGTCAAGAGCAAGATTCAGGACAAGGAAGGCATCCCTCCTGACCAGCAGCGT 9746
Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAA 178099
| || || |||||||| |||||||| || ||| | || |||| |||||||||
Sbjct 9745 TTGATTTTTGCCGGAAAGCAGCTCGAGGACGGACGCAC-CTTGAGCGATTATAA 9693
>seq1954
Length=527115
Score = 87.8 bits (96), Expect = 4e-12
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| || || ||||| || ||||||||||| || |||||||| || |||||||||||
Sbjct 282596 GACAAGGAGGGCATCCCCCCTGACCAGCAACGTCTCATCTTCGCTGGCAAACAGCTCGAG 282655
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| || | || ||| | ||||| ||| |||| || || || || || || || ||
Sbjct 282656 GACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCCACCCTTCACCTCGT 282711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203689188276456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |