Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2055 116 8e-21 >seq2055 Length=75196 Score = 116 bits (128), Expect = 8e-21 Identities = 309/467 (66%), Gaps = 4/467 (1%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232 ||||| | ||||||||||| | | |||||||||||| | || ||||| ||| Sbjct 73273 TTTGCTCAACGTCTCGTCGCTTTCGCTGCTGTTGAAGGTATCTTCTTCTCCGGCTCCTTC 73332 Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292 | ||||||| ||||| ||| ||| | ||| | || || | || ||||| Sbjct 73333 GCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTTACCTTCTCCAACGAA 73392 Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGC-TTATGTATTCAAAGCT 230351 ||||| || || ||||||||||| || | || || || || | | || | || Sbjct 73393 CTCATCTCCCGTGATGAGGGTCTCCA-CACCGATTTCGCATGCCTTCTCTTCTCTCATCT 73451 Query 230352 CCAGAACAAGCTA-CCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACG 230410 | || || | | ||| | || || |||| | ||||||| ||||| ||||||| || Sbjct 73452 CAAGCACCGCCCATCCAAGCAAGCCGTTCAAG-ATGTCATTACCGAAGCCGTTGAAATCG 73510 Query 230411 AAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTA 230470 | | || ||| | || ||| |||| ||| || | ||||||||| | | || | Sbjct 73511 AGCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTCTTGGGCATGAACTCCAACCTCA 73570 Query 230471 TGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAG 230530 || || |||||||| ||||| || || || | | | || | ||| |||| ||| Sbjct 73571 TGAAGCAATACATCGAGTTCGTTGCTGATCGTCTCCTCATGGCTTTGGGTAACGACAAAT 73630 Query 230531 TGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCA 230590 | ||||| |||| ||||| || | || |||||| ||| || | || ||||||| Sbjct 73631 TCTACAAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCTTGGCTGGTAAGACCA 73690 Query 230591 ACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||||||| ||| | || |||| || || | | | ||||| ||| Sbjct 73691 ACTTCTTCGAGAAGAGAGTTGGTGATTACCAAAAGGCCGGTGTTATG 73737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057788707024520