Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2550 95.1 9e-15 >seq2550 Length=61157 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 ||||||||||| || | ||||||||| ||||| |||| ||| |||| ||| Sbjct 5126 ACATAAAATTGCGCAAACATATGACAAGGTGGCAAAGCCATCAACTTAATATCTGCCACA 5185 Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAA- 101985 ||||| |||| || | ||||||||||| | || ||||| || | | || ||| Sbjct 5186 TTCCACGCACTCAAAATAATCCTTCTATCCC-ACGGATTGTTCTTCAATTTCCACACAAT 5244 Query 101986 CTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGC 102045 || | ||| ||||| || | |||| ||||||| | | || | | |||| || Sbjct 5245 CTCCGCCAGTTGATCAACACCCTGTCCTGTATAATCCGTCTCTGCATCGATGTATTTAGC 5304 Query 102046 TCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094 |||||||| | ||| ||||||||||||||||| || | ||| |||||| Sbjct 5305 GCCGAAATGTCGCCATTGAAATCCATACACAGGACCTAAATCACCTTCA 5353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361239735241604