Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05]
2,604 sequences; 40,732,201 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2055 116 5e-21
>seq2055
Length=75196
Score = 116 bits (128), Expect = 5e-21
Identities = 198/282 (70%), Gaps = 4/282 (1%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | |||||| ||||| ||
Sbjct 72824 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATCGATTTG 72883
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| || |||| ||| | | | | ||| ||||| | || || ||
Sbjct 72884 TCAAAGGATCTTCACGACTGGAGCAACAGACTCAATGACGACGAGCGTTACTTCATCTCC 72943
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197
|| || | || ||||| || | ||||| ||||| |||||||| || || |||| | |
Sbjct 72944 CATGTTCTTGCATTCTTCGCAGCATCCGACGGAATTGTCAACGAGAACTTGGTTGAAA-G 73002
Query 125198 ATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256
|||| || ||| | || ||||||| ||||||||||| |||||||||||||
Sbjct 73003 ATTCAGCGGCGAAGTTCAA-ATCCCAGAGGCACGATGCTTTTACGGTTTCCAAATCATGA 73061
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACA 125298
| |||||| | ||||| |||| |||||| || || ||||
Sbjct 73062 TGGAGAACATCCACTCCGAAACATACTCTCTTCTCATCGACA 73103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741035078523040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |