Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2055 116 5e-21 >seq2055 Length=75196 Score = 116 bits (128), Expect = 5e-21 Identities = 198/282 (70%), Gaps = 4/282 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| || || ||||| | |||||| ||||| || Sbjct 72824 ATCTGGCAGATGTACAAGAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATCGATTTG 72883 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | | | ||| ||||| | || || || Sbjct 72884 TCAAAGGATCTTCACGACTGGAGCAACAGACTCAATGACGACGAGCGTTACTTCATCTCC 72943 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197 || || | || ||||| || | ||||| ||||| |||||||| || || |||| | | Sbjct 72944 CATGTTCTTGCATTCTTCGCAGCATCCGACGGAATTGTCAACGAGAACTTGGTTGAAA-G 73002 Query 125198 ATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 |||| || ||| | || ||||||| ||||||||||| ||||||||||||| Sbjct 73003 ATTCAGCGGCGAAGTTCAA-ATCCCAGAGGCACGATGCTTTTACGGTTTCCAAATCATGA 73061 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACA 125298 | |||||| | ||||| |||| |||||| || || |||| Sbjct 73062 TGGAGAACATCCACTCCGAAACATACTCTCTTCTCATCGACA 73103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741035078523040