Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1908 89.7 4e-13 >seq1908 Length=31596 Score = 89.7 bits (98), Expect = 4e-13 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 5582 CGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCG 5641 ||||| | |||| |||||| | || |||||| ||| ||||||||||| || | |||| Sbjct 15225 CGCTCCAAAATCAACTGCGCAACACGATCGCCCTCCTTGACCTCGAAATCCTTTTCGCCG 15284 Query 5642 AAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCC 5701 |||||| || | || || | ||| || || || ||||| || ||||| |||||| Sbjct 15285 TGGTTGAAGAGGAGAACTTTTACTTGGCCCCGATAATCTGCGTCGATTACGCCGGCGCCC 15344 Query 5702 ACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 |||||| | ||| || || || || ||||| || || | |||||||| Sbjct 15345 GTGTCGATCATGTGTTTAGAAGCGAGTCCAGAGCGTGGGGCGATGCGGCCGT 15396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430040751686048