Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05]
2,604 sequences; 40,732,201 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq2550 86.0 7e-12
>seq2550
Length=61157
Score = 86.0 bits (94), Expect = 7e-12
Identities = 163/238 (68%), Gaps = 4/238 (2%)
Strand=Plus/Plus
Query 7007 CATAAAATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCT--ATATCAGATGG 7064
|||||||||| || | |||||| || || ||| | | | | || ||||| |
Sbjct 5127 CATAAAATTGCGCAAACATATGACAAGGTGGCAAAGC--CATCAACTTAATATCTGCCAC 5184
Query 7065 ATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAAT 7124
|||||| ||| ||| | ||| | |||||| ||||| | || ||||| | |||
Sbjct 5185 ATTCCACGCACTCAAAATAATCCTTCTATCCCACGGATTGTTCTTCAATTTCCACACAAT 5244
Query 7125 TATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGC 7184
| |||||| | |||||| ||| ||||| || | || || || |||||
Sbjct 5245 CTCCGCCAGTTGATCAACACCCTGTCCTGTATAATCCGTCTCTGCATCGATGTATTTAGC 5304
Query 7185 TCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGA 7242
|| ||||||| ||||||||| ||||| | |||||||||||||||||| | ||||||
Sbjct 5305 GCCGAAATGTCGCCATTGAAATCCATACACAGGACCTAAATCACCTTCAGCCCGATGA 5362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595852604366400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |