Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05]
2,604 sequences; 40,732,201 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq151 113 7e-21
seq2132 104 4e-18
>seq151
Length=10676
Score = 113 bits (124), Expect = 7e-21
Identities = 87/101 (86%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||||||||| |||| | | |||| ||||||||||| |||||||||||||||||
Sbjct 7591 GCTAAGCGTCATCGTAAGAT-TTTGAGAGACAACATCCAAGGTATCACCAAGCCAGCTAT 7649
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
| | ||||| |||||||||||||| ||||||||| | ||||
Sbjct 7650 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 7690
Score = 98.7 bits (108), Expect = 2e-16
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| ||||||||||| |||||| | || || | |||||
Sbjct 7805 TGATCTACGAAGAGACCCGTGGTGTTTTGAAGACTTTCCTCGAAGGTGTCATTCGTGATG 7864
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| | ||| |||||||| || || || ||||| || || ||| | || | ||||| |
Sbjct 7865 CCGTTACCTACACCGAGCATGCCAAGCGCAAGACCGTTACTTCCCTCGACGTTGTCTACG 7924
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||||||| | |||||||||| | |||||||| || |||||
Sbjct 7925 CATTGAAGAGACAAGGCCGTACCCTCTATGGTTTCGGTGGTTAA 7968
>seq2132
Length=22760
Score = 104 bits (114), Expect = 4e-18
Identities = 84/99 (85%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||||||| ||| | | |||| ||||||||||| || || |||||||||||
Sbjct 6844 GCCAAGCGTCATCGCAAGATTT-TGAGAGACAACATCCAAGGCATAACTAAGCCAGCTAT 6786
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
| | ||||| |||||||||||||| ||||||||| ||||
Sbjct 6785 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 6747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79072819144572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |