Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2210 116 4e-21 >seq2210 Length=20483 Score = 116 bits (128), Expect = 4e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 26779 TTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCG 26838 |||| || || | || ||||| | || ||| |||| | ||||| ||||||||||| Sbjct 17564 TTGTTAAGACTCTCACGGGAAAGACCATTACCCTCGAGGTTGAATCTTCCGACACCATCG 17623 Query 26839 AGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCA 26898 | | |||||| |||||| ||||| ||||| || ||||||||||||||| | | | Sbjct 17624 ACAACGTCAAATCGAAGATTCAAGACAAGGAAGGCATCCCTCCCGATCAACAACGTTTGA 17683 Query 26899 TTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAG 26958 | | || ||||||||||||||| |||| | | || ||| || ||||| || || | Sbjct 17684 TCTTCGCCGGCAAACAACTCGAGGATGGCCGTACACTCTCCGATTACAACATCCAGAAGG 17743 Query 26959 AATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | ||||| | || ||||||| |||||| | || || Sbjct 17744 AGTCTACCCTTCACTTGGTCCTCAGACTTCGTGGTGG 17780 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 || ||||| | ||||| | || | ||||| | ||| ||||| || | |||||| Sbjct 17295 ACCGGAAAGACCATCACTCTTGAGGTCGAATCCAGCGATACCATTGACAATGTCAAATCC 17354 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 ||||| ||||| || || || ||||| || ||||| | | |||| || ||||||| Sbjct 17355 AAGATCCAGGACAAGGAGGGAATTCCTCCTGACCAACAGCGTTTGATTTTCGCCGGCAAA 17414 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 ||||||||||||| | | | | | ||||| || ||||| || || || |||||| |||| Sbjct 17415 CAACTCGAAGATGGTCGCACCTTGAGCGATTACAACATCCAGAAGGAGTCTACTCTCCAC 17474 Query 26973 CTGGTCCTGAGACTTAGAGGAGG 26995 ||||||| |||||| | || || Sbjct 17475 TTGGTCCTCAGACTTCGTGGTGG 17497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478646819538880