Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq2550 95.1 1e-14 >seq2550 Length=61157 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 ||||||||||| |||| ||||| || || | ||||||||| | || ||| Sbjct 5126 ACATAAAATTGCGCAAACATATGACAAGGTGGCAAAGCCATCAACTTAATATCTGCCACA 5185 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 |||||||||| || ||| || |||||||| |||||| || || | | |||||| Sbjct 5186 TTCCACGCACTCAAAATAATCCTTCTATCCCACGGATTGTTCTTCAATTTCCACACAATC 5245 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCC 20536 | || || ||| |||| ||||| |||||||| || | || || || | ||| || Sbjct 5246 TCCGCCAGTTGATCAACACCCTGTCCTGTATAATCCGTCTCTGCATCGATGTATTTAGCG 5305 Query 20537 CCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTC 20583 || || || | ||| || || || || ||||| || ||||| || || Sbjct 5306 CCGAAATGTCGCCATTGAAATCCATACACAGGACCTAAATCACCTTC 5352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441358433315360