Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2210 84.2 2e-11 >seq2210 Length=20483 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| || || | || | || || || || || ||||||||||| Sbjct 17498 ACCACCACGAAGTCTGAGGACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCGCT 17439 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| || || |||||||| |||| | ||||| ||||| ||||| Sbjct 17438 CAAGGTGCGACCATCTTCGAGTTGTTTGCCGGCGAAAATCAAACGCTGTTGGTCAGGAGG 17379 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||| || || || || || || || ||| || | ||||| | || || || Sbjct 17378 AATTCCCTCCTTGTCCTGGATCTTGGATTTGACATTGTCAATGGTATCGCTGGATTCGAC 17319 Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419 || | ||| | |||||| ||||| Sbjct 17318 CTCAAGAGTGATGGTCTTTCCGGT 17295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499628536561760