Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05]
2,604 sequences; 40,732,201 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1009 246 4e-60
seq2055 116 4e-21
>seq1009
Length=94825
Score = 246 bits (272), Expect = 4e-60
Identities = 1175/1826 (64%), Gaps = 75/1826 (4%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204
||||| || ||||||| ||||| | || | || |||| ||| |||||||||| |
Sbjct 22471 TACTTCGGCTTCAAAACACTTGA-ACGATCATACCTTCTACGTCTCGATGGCAAGGTTGC 22529
Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264
||| ||||| | ||| ||||||| || || | || || ||||| || || || ||
Sbjct 22530 AGAACGTCCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATCGA 22589
Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAA 75323
|| | || ||||| || |||||| | | ||| || | || || | ||||
Sbjct 22590 AAGTGCTATCGAAACATATAACTTGATGTCGAACAAGTACTTT-ACACATGCCTCCCCAA 22648
Query 75324 CCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACA 75383
| |||||| ||| ||||| ||| | | || | || |||||||| |||| || |
Sbjct 22649 CACTCTTCTCTGCGGGTACTCCACAAGCACAACTTTCATCGTGCTTCCTCATCGACATGA 22708
Query 75384 AGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGT 75443
||||||| || | ||||| || | ||| | | | ||||| |||||||||
Sbjct 22709 AGGAGGATAGTATTGATGGTATTTACGACACTTTGAAGATCTGTGCCATGATCTCAAAGA 22768
Query 75444 GGGCTGGGGGTATTGGG------ATGCACA---TCCATGATGTGAGAGCCAATAAATCTC 75494
||||| |||||||| || |||| ||| || | | || ||| ||| |
Sbjct 22769 ATGCTGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGC--ATACATCGC 22826
Query 75495 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 75554
|| || ||||| | || | |||||| |||| ||||| || || || |||
Sbjct 22827 T-------GGTACCAATGGAAACTCTAACGGTATTGTTCCTATGCTCCGAGTTTTCAACA 22879
Query 75555 CCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCT 75608
||| || | ||||| | |||| || | |||| | || | | || || |
Sbjct 22880 ACACTGCCAGATATGTTGACCAAGGTGG---TAACAAGCGTCCTGGTGCTTTTGCTGTTT 22936
Query 75609 ACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTG 75668
|| | || ||||||||||| ||| | | ||||||||||| |||| || || |||
Sbjct 22937 ACCTTGAGCCATGGCATGCGGATGTTTTCGAGTTCCTTGATCTACGTAAGAATCATGGTA 22996
Query 75669 ACGAAGAGGCTCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATG 75727
| ||||| | ||| || | | |||||||| | || |||||||||| || || ||||||
Sbjct 22997 AGGAAGAAGTTCG-TGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATG 23055
Query 75728 AAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTC 75787
||||| ||||| || || ||||| |||| | || || || | ||||| |
Sbjct 23056 AAGCGAGTTGAAAAGAACGGAGAATGGACTCTCATGTGCCCCAACGAATGTCCAGGCTTG 23115
Query 75788 TCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG-AGGGTAG 75846
| || | ||||||||||| || || |||||| || || ||| ||| ||
Sbjct 23116 GCAGATGTTTATGGTGAGGAGTTCGAGGCTCTCTACGAGGGTTACGAGAAGGCAGGCAAG 23175
Query 75847 AGCCAATGC--GACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGAC 75903
| | || |||| | | || | | | | ||||| | |||||||| || | || ||
Sbjct 23176 GGTC---GCAAGACTAT-CAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAAGCTCAAAC 23231
Query 75904 GGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAA 75963
||||| |||| || | ||||||||||| ||||| || ||||||||||| ||||||||
Sbjct 23232 CGAGACCGGAAATCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAA 23291
Query 75964 GAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAA 76023
||| | || || || ||||| || | ||||| ||||| | |||||| | |
Sbjct 23292 GAACCTCGGTACTATTCGAAGCTCCAACTTGTGCACAGAAATCGTGGAGTACTCTGCACC 23351
Query 76024 GGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA--ATGAA 76081
|||||| ||| || || ||||| || ||||| | |||| | |||| |||||
Sbjct 23352 AGATGAGGTTGCTTGCTGTAACTTGGCTTCTATCGCTTTGCCAACATTCGTCAACATGAA 23411
Query 76082 -GAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAA 76140
||| | |||| ||| | |||| ||||| || | || ||||| | |||
Sbjct 23412 TGAG---GGAACTTATGACTTCCAAAAGCTTCACGAGGTTGTTCAGGTTGTTGTTAGAAA 23468
Query 76141 TCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTG-AGACTGCGCGAAAGTCTAATA 76199
| ||| ||||||||| |||| ||||| || | ||| || ||||| |||
Sbjct 23469 CTTGAACAAGATCATTGACATCAATTACTATCCAGTCGCAGA-AGCCAGAAAGAGCAATT 23527
Query 76200 TGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT--TTGTG 76257
| ||||| |||||||| | | | |||||||||||||| || |||| ||| || | |
Sbjct 23528 TCCGACATAGACCTATCGCTGTCGGTGTTCAAGGTCTTGCTGATG-CTTTCTTGGCTCTT 23586
Query 76258 CCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCAT 76317
| || | |||| || || ||||||||| | | || | || || || || ||
Sbjct 23587 CGTCTTC-CATTCGACTCCCCAGAAGCCAAGCACCTCAACATCCAAATTTTCGAGACTAT 23645
Query 76318 GTATCACGCATCCCTGGAGGCGAGTTGT-GAATTGGCTGAAGCCCAAGGTTCCTATGAGA 76376
|| ||||| ||| || | || || | || | | | || | || || |
Sbjct 23646 CTACCACGC-CGCCTTGACCTCATCCGTCGAGATTGCAAAGGAACTTGGCCCATACGACA 23704
Query 76377 CATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAA 76436
| | | | || ||||| | || | || | || || | ||||||||||| || | |
Sbjct 23705 CTTATCAAGGCTCTCCAGTCTCGAAGGGAGAACTCCAATATGATATGTGGG-GTGTTACA 23763
Query 76437 CCAAGCTCA--ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCG 76494
|| | || | | || ||||| | ||| || ||||||| | | || | ||
Sbjct 23764 CCTA-CTGATTTGTGGGATTGGGACTCCTTGAAGCAATCCATCAAGCAACACGGAATCCG 23822
Query 76495 TAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATA 76553
|||| || | | ||||| ||||| || || ||| | |||| |||||| | |
Sbjct 23823 TAACTCCCTCCTCGTTGCACCCATGCCTACTGCTAGCACATCCCAAATTCTTGGCT-TCA 23881
Query 76554 ATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGT 76613
||||||| || ||||| ||||| ||||||||||| | | || || || || |
Sbjct 23882 ATGAATGTTTCGAACCTTACACCTCAAACATCTACTCCCGTCGTGTTCTTGCCGGAGAAT 23941
Query 76614 TTGTCATTGTCAA-CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAG 76672
| | || || | | | || |||| ||||| | || ||||||||||| |
Sbjct 23942 TCCAAGTCGTTAATCCATGGCTTC-TCAAAGACCTTGTCGATATGGGTCTCTGGTCTGAC 24000
Query 76673 GATATGAAGGA---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATAT 76728
| |||||| | | ||| || ||| ||||| ||||| ||||| ||| | ||||
Sbjct 24001 AACATGAAGAACCGTATCATTGCTGA----TGGTGGATCCATCCAAAACATCCCCAATAT 24056
Query 76729 CCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGA--TGTC 76786
|||| ||| |||||| ||||||| || || ||||||||| | || || |
Sbjct 24057 TCCAGCTGACATCAAGGCTCTCTACAAGACCGTTTGGGAAATC--TCTCAACGAACAATT 24114
Query 76787 ATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTC 76846
|| | ||||| || ||||||||| || || |||||| |||| ||||| | |
Sbjct 24115 GTTCAAATGGCTGCTGATCGTGGTGCATTTATCGATCAATCTCAATCAATGAACATTCAC 24174
Query 76847 ATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGG 76906
||| | ||| || ||| ||| | | ||||||||| | | |||||| |||
Sbjct 24175 ATGAAGGATCCTACAATGGGTAAGATTACATCTATGCATTTTGCTGGTTGGAAATTGGGT 24234
Query 76907 CTCAAAACCGGAATGTACTATCTCCG 76932
| || ||||||||||||||||| ||
Sbjct 24235 TTGAAGACCGGAATGTACTATCTACG 24260
>seq2055
Length=75196
Score = 116 bits (128), Expect = 4e-21
Identities = 342/519 (66%), Gaps = 20/519 (4%)
Strand=Plus/Plus
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066
|| || || || |||||||||| | ||||| | |||||| | | |||| |||
Sbjct 73210 GTTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATCCAAGACAAGAACTC- 73268
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
| |||| || | || || | || || || ||| || ||||||||||||||||| ||
Sbjct 73269 CACCTTTGCTCAACGTCTCGTCGCTTTCGCTGCTGTTGAAGGTATCTTCTTCTCCGGCTC 73328
Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186
||| | | || | ||| | |||||||| ||||||||| | || || |||||| ||
Sbjct 73329 CTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTTACCTTCTCCAA 73388
Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTT----TGCCGTGGAGCTCTTCA 65242
||||| || ||||| ||||||||||||||| || || |||| | ||||||
Sbjct 73389 CGAACTCATCTCCCGTGATGAGGGTCTCCACACCGATTTCGCATGCCTT----CTCTTC- 73443
Query 65243 AGACTTTGCGTAATAGACCCACTACCGAAACTA----TCCACGCCATCGTGAAAGAGGCG 65298
|| | | | ||| | | | || | | | || | || | | || ||
Sbjct 73444 --TCTCATC-TCAAGCACCGCCCATCCAAGCAAGCCGTTCAAGATGTCATTACCGAAGCC 73500
Query 65299 GTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAAC 65358
||||| || ||| ||| ||| | || || || || ||| |||| | || ||||||
Sbjct 73501 GTTGAAATCGAGCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTCTTGGGCATGAAC 73560
Query 65359 TCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGG 65418
|| | ||| | ||||| |||| || | |||||||||||| | |||||
Sbjct 73561 TCCAACCTCATGAAGCAATACATCGAGTTCGTTGCTGATCGTCTCCTC-ATGGCTTTGGG 73619
Query 65419 GTGCCACCCATT-TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGA 65477
| || ||| | || | | || ||||| ||||| ||||| ||||| | | |
Sbjct 73620 TAACGACAAATTCTACAAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCTTGGC 73679
Query 65478 TGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
||| |||||||||||||| |||||| ||||||| || ||
Sbjct 73680 TGGTAAGACCAACTTCTTCGAGAAGAGAGTTGGTGATTA 73718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596550181659520
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