Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2210 89.7 4e-13 >seq2210 Length=20483 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 110283 TTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTCG 110342 |||| || ||| | || || || ||||||||| |||| || || ||| || ||| Sbjct 17564 TTGTTAAGACTCTCACGGGAAAGACCATTACCCTCGAGGTTGAATCTTCCGACACCATCG 17623 Query 110343 GCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTA 110402 | | || ||| ||||||| ||||| |||||| | || ||||||||| | | | Sbjct 17624 ACAACGTCAAATCGAAGATTCAAGACAAGGAAGGCATCCCTCCCGATCAACAACGTTTGA 17683 Query 110403 TTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAG 110462 | | || || ||||| || ||||||| | | ||| | | ||||||||||| || || | Sbjct 17684 TCTTCGCCGGCAAACAACTCGAGGATGGCCGTACACTCTCCGATTACAACATCCAGAAGG 17743 Query 110463 AATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 | ||||| | ||| |||| | ||||| || || || Sbjct 17744 AGTCTACCCTTCACTTGGTCCTCAGACTTCGTGGTGG 17780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412828497955772