Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2210 100 4e-16 >seq2210 Length=20483 Score = 100 bits (110), Expect = 4e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| || | || || || || ||||| || ||||| | || |||||| | | | Sbjct 18011 TGCAAATCTTTGTCAAGACCTTGACTGGAAAGACCATTACATTGGAAGTAGAATCGTCA- 18069 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||||||| | ||||| || || || || ||| || ||||||||||| |||||| Sbjct 18070 GATACTATTGATAATGTTAAGTCGAAGATCCAGGATAAGGAGGGCATTCCACCTGATCAA 18129 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| || | || |||||||| || || || || ||| ||||| | | ||||| ||| Sbjct 18130 CAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGATGGCAGAACCCTTTCGGATTACAAT 18189 Query 146211 ATACAAAAAGAA 146222 || ||||| ||| Sbjct 18190 ATTCAAAAGGAA 18201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786140810283680