Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2210 87.8 2e-12 >seq2210 Length=20483 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512 || || | ||| ||||| ||||| || ||||||||| | ||| ||| ||||||| Sbjct 17759 AAGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCGGAGA--GTGTACGGCCATCCTCGA 17702 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || ||||| ||| | || | || || || ||||||||||||||||||||||| | Sbjct 17701 GTTGTTTGCCGGCGAAGATCAAACGTTGTTGATCGGGAGGGATGCCTTCCTTGTCTTGAA 17642 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| |||| | || | ||||||| | || || |||| ||| | ||| || | Sbjct 17641 TCTTCGATTTGACGTTGTCGATGGTGTCGGAAGATTCAACCTCGAGGGTAATGGTCTTTC 17582 Query 133633 CGGTCAGAGTTTTTAC 133648 | || ||||| || || Sbjct 17581 CCGTGAGAGTCTTAAC 17566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483405064652960