Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1009 138 1e-27 seq2210 91.5 1e-13 >seq1009 Length=94825 Score = 138 bits (152), Expect = 1e-27 Identities = 323/482 (67%), Gaps = 9/482 (2%) Strand=Plus/Minus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 ||||||||| |||| ||||| || | ||| | ||||||| ||||||||||||||| || Sbjct 23108 GGACATTCGTTGGGGCACATGAGAGTCCATTCTCCGTTCTTTTCAACTCGCTTCATGAAT 23049 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 | ||| || | ||| || ||||| || ||||| | || ||||| |||| || Sbjct 23048 AGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTACC-ATG 22990 Query 131723 AtttttttCAAATTTAAA-AAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781 ||| || | | || || || |||| ||||||||||| || || | || || || Sbjct 22989 ATTCTTACGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGCTCAAGGTAAACAGC 22930 Query 131782 CATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTGTTGTATAC 131838 | || || ||||| ||| ||||| | ||||| | | |||||||| | || Sbjct 22929 AAAAGCACCAGGACGCTTGTTACCACCTTGGTCAACATATCTGGCAGTGTTGTTGAAAAC 22870 Query 131839 GCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATT 131898 || | ||| || | | |||||| | |||||||||||| | ||||| ||| | Sbjct 22869 TCGGAGCATAGGAACAATACCGTTAGAGTTTCCATTGGTACCAGCGATGTATGCACCAGT 22810 Query 131899 GGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCA 131958 || | |||| |||||| |||||| |||||||| || | | || ||||| | || || Sbjct 22809 AGCACGGATTCTGTGAATGTTGAGACCAATACCACCAGCATTCTTTGAGATCATGGCACA 22750 Query 131959 TTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCA 132018 | | | ||||| || ||||| || | || ||| | ||||||| | ||||| Sbjct 22749 GATCTTCAAAGTGTCGTAAATACCATCAATACTATCCTCCTTCATGTCGATGAGGAAGCA 22690 Query 132019 AGAGGACAACTGT--TGGTGAAATGTGCCGGCTGAAAACAATGTGGGGCTGGCGTGTGTA 132076 || || | ||| | ||| | || || || || || | ||| ||| ||| |||||| Sbjct 22689 CGATGAAAGTTGTGCTTGTGGA--GTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTA 22632 Query 132077 AA 132078 || Sbjct 22631 AA 22630 >seq2210 Length=20483 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||||||||| || || || ||||| || ||||| || | |||| | || || Sbjct 17990 ACCAAATGTAAGGTCGATTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCC 17931 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||| ||||| || | || ||||| |||||||| || || | |||||| ||||| | Sbjct 17930 AACTGCTTACCAGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCCTCCTTATCTTGG 17871 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | || | ||||| | | ||||| || | ||| || | || Sbjct 17870 ATCTTGGACTTCACATTGTCGATGGTGTCCGATGACTCAACCTCCAAAGTGATTGTCTTC 17811 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || || || |||||||||||| Sbjct 17810 CCAGTGAGGGTCTTGACGAAGATTTGCATA 17781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424920914175648