Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05]
2,604 sequences; 40,732,201 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1009 223 4e-53
seq2055 145 9e-30
>seq1009
Length=94825
Score = 223 bits (246), Expect = 4e-53
Identities = 1161/1816 (64%), Gaps = 75/1816 (4%)
Strand=Plus/Plus
Query 104166 TCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGTGTCTTGATGGAAACCCCA 104224
||||||| ||||| | || | || |||| ||| |||||||| | ||| |||
Sbjct 22481 TCAAAACACTTGA-ACGATCATACCTTCTACGTCTCGATGGCAAGGTTGCAGAACGTCCA 22539
Query 104225 CAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTG 104284
|| | ||| ||||||| || ||| | |||||||| || || || || || || |
Sbjct 22540 CAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATCGAAAGTGCTATC 22599
Query 104285 GAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAA 104343
|| ||||| || |||||| | | ||| || | || || | ||||| ||||||
Sbjct 22600 GAAACATATAACTTGATGTCGAACAAGTACTTT-ACACATGCCTCCCCAACACTCTTCTC 22658
Query 104344 TGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTC 104403
||| ||||| ||| | | ||| | || |||||||| |||| || ||||||||
Sbjct 22659 TGCGGGTACTCCACAAGCACAACTTTCATCGTGCTTCCTCATCGACATGAAGGAGGATAG 22718
Query 104404 AATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGG 104463
|| | ||||| || | ||| | | | ||||| ||||||||| ||||| ||
Sbjct 22719 TATTGATGGTATTTACGACACTTTGAAGATCTGTGCCATGATCTCAAAGAATGCTGGTGG 22778
Query 104464 TATTGGG------ATGCACA---TCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514
|||||| || |||| ||| || | | || ||| ||| | ||
Sbjct 22779 TATTGGTCTCAACATTCACAGAATCCGTGCTACTGGTGC--ATACATCGCT-------GG 22829
Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574
|| ||||| | || | |||||| |||| ||||| || || || ||| ||| || |
Sbjct 22830 TACCAATGGAAACTCTAACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAG 22889
Query 104575 CTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCC 104628
||||| | |||| ||| ||||| || || | || || || ||||||||
Sbjct 22890 ATATGTTGACCAAGGTGGTAACAAGCGTCCT---GGTGCTTTTGCTGTTTACCTTGAGCC 22946
Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688
|||||| |||||| | | ||||||||||| | ||| || || ||| | || || |
Sbjct 22947 ATGGCATGCGGATGTTTTCGAGTTCCTTGATCTACGTAAGAATCATGGTAAGGAAGAAGT 23006
Query 104689 GCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747
|| ||| ||||||||||||| ||| | |||||||| ||||| ||||||||| ||||||
Sbjct 23007 TCG-TGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGAGTTG 23065
Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807
| ||| || | ||| ||||| | || || || | || || | | ||||
Sbjct 23066 AAAAGAACGGAGAATGGACTCTCATGTGCCCCAACGAATGTCCAGGCTTGGCAGATGTTT 23125
Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC-- 104865
||||||||||| || || || ||| |||||| | | ||| | | | | ||
Sbjct 23126 ATGGTGAGGAGTTCGAGGCTCTCTACGAGGGTTACGAGAAGGCAGG-CAAGGGTC-GCAA 23183
Query 104866 GACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925
||| | ||| | | ||| | |||||||| | ||||||||||||| || |
Sbjct 23184 GACTATCAAGGCTCAAAAGCTTTGGTACTCTATTCTCGAAGCTCAAACCGAGACCGGAAA 23243
Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985
|| | ||||||||||||||| || || ||| | ||||| || |||||||| | |||
Sbjct 23244 TCCTTTCATGCTTTACAAAGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTCGGTAC 23303
Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045
|| || ||||| | || ||||||||| |||| | | | ||||||| ||
Sbjct 23304 TATTCGAAGCTCCAACTTGTGCACAGAAATCGTGGAGTACTCTGCACCAGATGAGGTTGC 23363
Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-ACAT 105104
| |||||| | || || |||||| | || | | || | | || | | || |
Sbjct 23364 TTGCTGTAACTTGGCTTCTATCGCTTTGCCAACATTCGT-CAACATGAATGAGGGAACTT 23422
Query 105105 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTA 105164
||| | |||| || ||||| ||| | ||| | |||| | |||| | |
Sbjct 23423 ATGACTTCCAAAAGCTTCACGAGGTTGTTCAGGTTGTTGTTAGAAACTTGAACAAGATCA 23482
Query 105165 TTGATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223
|||| | |||| || || || | ||| || | || ||| | |||| | ||
Sbjct 23483 TTGACATCAATTACTATCCAGTCGCAGA-AGCCAGAAAGAGCAATTTCCGACATAGACCT 23541
Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTT 105280
|| | | |||||||||| ||||| || |||| ||| | |||| ||| | ||||
Sbjct 23542 ATCGCTGTCGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTC---CATTC 23598
Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340
|| ||| ||||| ||| | |||| | || || ||||| || || ||||||||
Sbjct 23599 GACTCCCCAGAAGCCAAGCACCTCAACATCCAAATTTTCGAGACTATCTACCACGCCGC- 23657
Query 105341 CTTGAGGCGAGTTC--AGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398
||||| | | | ||| | ||| ||| ||| ||||| || || | | | || |
Sbjct 23658 CTTGA-CCTCATCCGTCGAGATTGCAAAGGAACTTGGCCCATACGACACTTATCAAGGCT 23716
Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCA 105456
|||||| || | || | || |||| ||||||||||| || | ||| | || |
Sbjct 23717 CTCCAGTCTCGAAGGGAGAACTCCAATATGATATGTGGG-GTGTTACACCTA-CTGATTT 23774
Query 105457 CTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516
| || ||||| | | ||| || ||||||| | | || | |||||| |||||
Sbjct 23775 GTGGGATTGGGACTCCTTGAAGCAATCCATCAAGCAACACGGAATCCGTAACTCCCTCCT 23834
Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTG 105575
| | || || ||||| || || ||| | |||| |||||| | |||||||| || |
Sbjct 23835 CGTTGCACCCATGCCTACTGCTAGCACATCCCAAATTCTTGGCT-TCAATGAATGTTTCG 23893
Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635
|||| ||||| | |||||||| | | || || ||||| || | || |
Sbjct 23894 AACCTTACACCTCAAACATCTACTCCCGTCGTGTTCTTGCCGGAGAATTCCAAGTCGTTA 23953
Query 105636 A--CA-AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGG 105692
| || || |||| | ||||| || || ||||||||||| | | ||||||
Sbjct 23954 ATCCATGGCTTCTC---AAAGACCTTGTCGATATGGGTCTCTGGTCTGACAACATGAAGA 24010
Query 105693 A---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAA 105748
| | ||| || ||| ||||| ||||| ||||| || |||||||| |||
Sbjct 24011 ACCGTATCATTGCTGA----TGGTGGATCCATCCAAAACATCCCCAATATTCCAGCTGAC 24066
Query 105749 ATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGA--TGTCATTGACATGG 105806
|| ||| | ||| || |||||||||||| | || || | || | ||||
Sbjct 24067 ATCAAGGCTCTCTACAAGACCGTTTGGGAAATC--TCTCAACGAACAATTGTTCAAATGG 24124
Query 105807 CCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTC 105866
| || ||||||||| || || |||||| |||| ||||| | |||| | ||
Sbjct 24125 CTGCTGATCGTGGTGCATTTATCGATCAATCTCAATCAATGAACATTCACATGAAGGATC 24184
Query 105867 CAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGG 105926
| || ||| ||| | | |||||||| | ||||||| |||| | || || |
Sbjct 24185 CTACAATGGGTAAGATTACATCTATGCATTTTGCTGGTTGGAAATTGGGTTTGAAGACCG 24244
Query 105927 GGATGTATTACCTCCG 105942
| ||||| || || ||
Sbjct 24245 GAATGTACTATCTACG 24260
>seq2055
Length=75196
Score = 145 bits (160), Expect = 9e-30
Identities = 348/519 (67%), Gaps = 18/519 (3%)
Strand=Plus/Plus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792
|||||| || || | ||||| || || |||||| | || ||| | | |||| | |
Sbjct 73209 AGTTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATCCAAGACAAGAACTC 73268
Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852
|||||||| | || ||| |||| || || |||||| |||||||||||||| || |
Sbjct 73269 CA-CCTTTGCTCAACGTCTCGTCGCTTTCGCTGCTGTTGAAGGTATCTTCTTCTCCGGCT 73327
Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912
||||| | | || | |||||||||||||| ||||||||| | || || ||||||||
Sbjct 73328 CCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTTACCTTCTCCA 73387
Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAAT 94972
|||| || ||||| ||||| ||||| |||||| || || || || ||| || |
Sbjct 73388 ACGAACTCATCTCCCGTGATGAGGGTCTCCACACCGATTTCGC-ATG--CCTTCTC---T 73441
Query 94973 TATTGCGTATTAA------ACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCG 95026
| | | | | || ||| | | | | |||| | | ||| |||||||
Sbjct 73442 TCTCTCATCTCAAGCACCGCCCATCCAAGCAAGCCGTTCAAGATGTCATTACCGAAGCCG 73501
Query 95027 TTGAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATT 95086
|||| || ||| ||| |||| | || || ||||| || |||||| | || ||||| |
Sbjct 73502 TTGAAATCGAGCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTCTTGGGCATGAACT 73561
Query 95087 CTGAAAAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGG 95146
| | ||| |||| || |||| || ||||| | | | | | | | |||
Sbjct 73562 CCAACCTCATGAAGCAATACATCGAGTTCGTTGCTGATCGTCTCCTCATG--GCTTTGGG 73619
Query 95147 TGCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGA 95204
| | ||| | | || || | || ||||| ||||||||||||||||| | | |
Sbjct 73620 TAACGACAAATTCTACAAGTCTACCAACCCATTCGACTTCATGGAGAACATCTCCTTGGC 73679
Query 95205 CGGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 95243
|| ||||| ||||||||||| ||||| ||||| || ||
Sbjct 73680 TGGTAAGACCAACTTCTTCGAGAAGAGAGTTGGTGATTA 73718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583241814860960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |