Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciborinia_20camelliae_20[genbank_20GCA_5F001247705.1_202015-08-05] 2,604 sequences; 40,732,201 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2055 113 4e-20 >seq2055 Length=75196 Score = 113 bits (124), Expect = 4e-20 Identities = 196/283 (69%), Gaps = 4/283 (1%) Strand=Plus/Minus Query 4813 CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAA 4872 ||||| |||| ||||| || || || || |||| || || || || || || | Sbjct 73114 CTTGA-TATATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGGATGTTCTCCATCATGA 73056 Query 4873 TCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTA 4932 | || || ||||||||||||| || |||| | |||||||||| | |||||||| | Sbjct 73055 TTTGGAAACCGTAAAAGCATCGTGCCTCTGGGATTTGAACTTCGCCGCTGAATCTTTCAA 72996 Query 4933 CTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAA 4992 | ||||| ||||| || || ||||| ||||| || || || | |||||| || || | Sbjct 72995 CCAAGTTCTCGTTGACAATTCCGTCGGATGCTGCGAAGAATGCAAGAACATGGGAGATGA 72936 Query 4993 AGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAA 5049 |||| | ||||| || ||| || |||||| | | | ||| || | ||||| | Sbjct 72935 AGTAACGCTCGTCGTCATTGAGTCTGTTGCTCCAGTCGTGAAGATCCTTTGACAAATCGA 72876 Query 5050 CTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 ||||| | ||||| || || || || || || |||||||| Sbjct 72875 TCTCTTCTGCGGTCCAGAAAGATGCCTCTGCCTTCTTGTACAT 72833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427036047047132