Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3 123 3e-23
>seq3
Length=8560927
Score = 123 bits (136), Expect = 3e-23
Identities = 245/354 (69%), Gaps = 8/354 (2%)
Strand=Plus/Minus
Query 16934 GGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCT 16993
||| | || || ||||||| | || || ||||| || || ||| | ||||| ||
Sbjct 3180845 GGTTTGTGCTTGAGATGTTGCATCAAGAGGCATGCAAAGTCCGTATGCATACCCTCATCA 3180786
Query 16994 CTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAA 17053
| | |||||| ||||| || || || | ||||||||| || |||| | |||
Sbjct 3180785 CGGGAGATAAGCTCGTTGGAGAAAGTGAGGCCGGGCATCAGGCCCTTGCTCTTGAGCCAG 3180726
Query 17054 AATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAAT 17113
|| ||||| || || || ||||| ||||| || || ||||||| |||||| || | |||
Sbjct 3180725 AAGATCGCTGCAAAGGATCCAGAGAAGAAGATGCCTTCGACGGCTGCAAAAGCAACTAAC 3180666
Query 17114 CGTTCGGCGTACGTCGCGTCTTTGT-TACGAATCCATTTCTGCACCCACTCGGCTTT-TT 17171
|| | ||| | ||| ||||| | | ||| ||||| | |||| || ||||| ||
Sbjct 3180665 CGCTGGGCAAAGCTCGACTCTTTATCTGCGA-TCCATCGCAAAGCCCAGTCTGCTTTCTT 3180607
Query 17172 GCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA-ATTTCTCTTTTTCCTGTAGG-TC 17229
|| ||||| || || || ||||| | ||| | || | |||| | || | || ||
Sbjct 3180606 GCGA-ATGCATGGGATTGTGTCAATGGCGTCAAAGAGATATGTCTTCT--CTTTGGGATC 3180550
Query 17230 GATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCAT 17283
| | |||||| || ||||| ||||||||||| || || || |||||||||||
Sbjct 3180549 CTTCACATACGTGTCAATGAGAAGGCTGTACATCTCCGAATGGATGTTCTCCAT 3180496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545056577120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |