Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 6e-12 >seq3 Length=8560927 Score = 86.0 bits (94), Expect = 6e-12 Identities = 317/490 (65%), Gaps = 10/490 (2%) Strand=Plus/Minus Query 16037 TCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTACC 16096 || || ||||| || || ||||||||||| | | |||| || || | | | || Sbjct 3180980 TCGGCGACAAACTCGATGTATTGACACATGAGCTTCGAATTCATGCCCAACAATGAGACG 3180921 Query 16097 GGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTC---TTTAATGATATCG 16153 || || || | || | ||| | || ||| ||| || ||||| ||||| | ||| Sbjct 3180920 GGGAGGGCATCGGTGAGAAACTCTTTTTCAATCTTGACAGCTTCGGTGATAATGTTTTCG 3180861 Query 16154 GTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCG 16213 || | || || ||| | || || || |||| | || || || || ||||| Sbjct 3180860 ATGAGTTTTGGGTC---GGGTTTGTGCTTGAGATGTTGCATCAAGAGGCATGCAAAGTCC 3180804 Query 16214 CAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTT 16273 ||| | || || || | | |||||| |||||||| ||||| | || ||||| Sbjct 3180803 GTATGCATACCCTCATCACGGGAGATAAGCTCGTTGGAGAAAGTGAGGCCGGGCATCAGG 3180744 Query 16274 CCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACA 16333 || |||| | |||||| ||||| ||||| || || || ||||| || || || || Sbjct 3180743 CCCTTGCTCTTGAGCCAGAAGATCGCTGCAAAGGATCCAGAGAAGAAGATGCCTTCGACG 3180684 Query 16334 GATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTAT-TACGAATCCATTTCTG 16392 | ||||||||| | ||| || | || | | | ||||||| | || |||||| | Sbjct 3180683 GCTGCAAAAGCAACTAACCGCTGGGCAAAGCTCGACTCTTTATCTGCG-ATCCATCGCAA 3180625 Query 16393 TACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA-ATTTCT 16451 |||| || ||||| | || || || || || ||||| | ||| | || | | Sbjct 3180624 AGCCCAGTCTGCTTTCTTGCGAATGCATGGGATTGTGTCAATGGCGTCAAAGAGATATGT 3180565 Query 16452 CTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTA 16511 | || || | ||| | | |||||| ||||| || | |||||||| || || || | Sbjct 3180564 C-TTCTCTTTGGGATCCTTCACATACGTGTCAATGAGAAGGCTGTACATCTCCGAATGGA 3180506 Query 16512 TGTTCTCTAT 16521 ||||||| || Sbjct 3180505 TGTTCTCCAT 3180496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413863014880