Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq3 86.0 6e-12
>seq3
Length=8560927
Score = 86.0 bits (94), Expect = 6e-12
Identities = 317/490 (65%), Gaps = 10/490 (2%)
Strand=Plus/Minus
Query 16037 TCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTCGTACC 16096
|| || ||||| || || ||||||||||| | | |||| || || | | | ||
Sbjct 3180980 TCGGCGACAAACTCGATGTATTGACACATGAGCTTCGAATTCATGCCCAACAATGAGACG 3180921
Query 16097 GGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTC---TTTAATGATATCG 16153
|| || || | || | ||| | || ||| ||| || ||||| ||||| | |||
Sbjct 3180920 GGGAGGGCATCGGTGAGAAACTCTTTTTCAATCTTGACAGCTTCGGTGATAATGTTTTCG 3180861
Query 16154 GTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCG 16213
|| | || || ||| | || || || |||| | || || || || |||||
Sbjct 3180860 ATGAGTTTTGGGTC---GGGTTTGTGCTTGAGATGTTGCATCAAGAGGCATGCAAAGTCC 3180804
Query 16214 CAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTT 16273
||| | || || || | | |||||| |||||||| ||||| | || |||||
Sbjct 3180803 GTATGCATACCCTCATCACGGGAGATAAGCTCGTTGGAGAAAGTGAGGCCGGGCATCAGG 3180744
Query 16274 CCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACA 16333
|| |||| | |||||| ||||| ||||| || || || ||||| || || || ||
Sbjct 3180743 CCCTTGCTCTTGAGCCAGAAGATCGCTGCAAAGGATCCAGAGAAGAAGATGCCTTCGACG 3180684
Query 16334 GATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTAT-TACGAATCCATTTCTG 16392
| ||||||||| | ||| || | || | | | ||||||| | || |||||| |
Sbjct 3180683 GCTGCAAAAGCAACTAACCGCTGGGCAAAGCTCGACTCTTTATCTGCG-ATCCATCGCAA 3180625
Query 16393 TACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA-ATTTCT 16451
|||| || ||||| | || || || || || ||||| | ||| | || | |
Sbjct 3180624 AGCCCAGTCTGCTTTCTTGCGAATGCATGGGATTGTGTCAATGGCGTCAAAGAGATATGT 3180565
Query 16452 CTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTA 16511
| || || | ||| | | |||||| ||||| || | |||||||| || || || |
Sbjct 3180564 C-TTCTCTTTGGGATCCTTCACATACGTGTCAATGAGAAGGCTGTACATCTCCGAATGGA 3180506
Query 16512 TGTTCTCTAT 16521
||||||| ||
Sbjct 3180505 TGTTCTCCAT 3180496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511413863014880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |