Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq3 98.7 8e-16
>seq3
Length=8560927
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| |||| || |||||||| || ||||| ||||| |
Sbjct 4895324 CCACCGCGGAGACGGAGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 4895383
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || | ||||| ||||||||||| || |||| || | ||||||||| ||
Sbjct 4895384 AGCGTCCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGA 4895443
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| || ||||| |||||| || || | | ||| || || | || |||
Sbjct 4895444 ATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACC 4895503
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || ||||||||||| || || ||||| || || || |||||
Sbjct 4895504 TCAAGAGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || |||| || | |||| || | |||| |||||| || ||||| ||||| | |
Sbjct 4894868 CCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 4894927
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || |||| |||| ||| ||||| ||| | || || | ||| |||||| ||
Sbjct 4894928 AGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGA 4894987
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| ||||| || || | | ||| || || | ||||
Sbjct 4894988 ATGCCTTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACC 4895047
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||||| ||||| || || || ||||| ||||| || |||||
Sbjct 4895048 TCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCAT 4895094
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 20961 CTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCG 21020
|||||||||| || | || || ||||| || ||||||||||| | || ||| || |
Sbjct 4895108 CTGAGCACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCA 4895167
Query 21021 TCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTG 21080
||||||| || ||||||||| | || || | ||| |||||| || | ||||||||||
Sbjct 4895168 TCCTCCAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTTG 4895227
Query 21081 TCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATG 21140
|| |||||| || || | | ||| || || | ||| ||| | || ||
Sbjct 4895228 TCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGGACGACTCAACTTCGAGCGTGATC 4895287
Query 21141 GTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || || || ||||| || || || |||||
Sbjct 4895288 GTCTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 4895322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422258767712144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |