Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq3 156 4e-33
seq7 120 3e-22
seq9 105 7e-18
>seq3
Length=8560927
Score = 156 bits (172), Expect = 4e-33
Identities = 342/508 (67%), Gaps = 6/508 (1%)
Strand=Plus/Plus
Query 116870 ATGGAGAACGTGCACTCGGAAATGTATTCGACC--CTCATCGACACGTACGTGCGCTCTT 116927
||||||||| | || ||||| ||||| | || ||||| |||||||| ||| |
Sbjct 3180496 ATGGAGAACATCCATTCGGAGATGTA--CAGCCTTCTCATTGACACGTATGTGAAGGATC 3180553
Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987
| | |||||| | | || ||||||| || || || || ||| | |||| |
Sbjct 3180554 CCAAAGAGAAGACATATCTCTTTGACGCCATTGACACAATCCCATGCATTCGCAAGAAAG 3180613
Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047
| || ||||| |||| |||||||| | | |||| | ||| | | |||| | || |
Sbjct 3180614 CAGACTGGGCTTTGCGATGGATCGCAGATAAAGAGTCGAGCTTTGCCCAGCGGTTAGTTG 3180673
Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107
| || || |||||||| ||| ||||||| || || || || || || || |||||||
Sbjct 3180674 CTTTTGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCAGCGATCTTCTGGCTCA 3180733
Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167
||| ||||| ||||||||||| |||||| ||||||||| |||||| | || ||||
Sbjct 3180734 AGAGCAAGGGCCTGATGCCCGGCCTCACTTTCTCCAACGAGCTTATCTCCCGTGATGAGG 3180793
Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227
|| ||||| |||||||| || | || | | ||| | ||| ||| | |
Sbjct 3180794 GTATGCATACGGACTTTGCATGCCTCTTGATGCAACATCTCAAGCACAAACCCGACCCAA 3180853
Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287
| | || | || ||||||| || ||| || || | || |||||||| |
Sbjct 3180854 AACTCATCGAAAACATTATCACCGAAGCTGTCAAGATTGAAAAAGAGTTTCTCACCGATG 3180913
Query 117288 CGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTC 117346
| || || || || |||| | |||| |||| | |||| ||||||||||||||
Sbjct 3180914 CCCTCCCCGTCTCATTGTTGGGCATGAATT-CGAAGCTCATGTGTCAATACATCGAGTTT 3180972
Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGG 117374
||||||||| | ||||| |||| ||||
Sbjct 3180973 GTCGCCGACCGCCTGCTCCTCGCCCTGG 3181000
Score = 147 bits (162), Expect = 2e-30
Identities = 160/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| | || ||||| |||||||| | || ||||| ||| |
Sbjct 4895550 ATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 4895491
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || || | |||||||||||||| || | |||||
Sbjct 4895490 GACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCTCCCGACCA 4895432
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || ||||| | ||| ||||||||||| || || | || || || | |||||||||
Sbjct 4895431 GCAGCGCCTCATTTTCGCCGGCAAACAGCTCGAGGATGGCCGGACGCTGAGCGACTACAA 4895372
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| | |||||||| || ||
Sbjct 4895371 CATCCAGAAGGAGTCGACGCTGCACCTGGT 4895342
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| | ||||| || || ||||| |||| || || | ||
Sbjct 4895322 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAGACGATCACGCTCGAAGTTGAGTCGTCC 4895263
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || || | ||||| || |||||||| |||||||
Sbjct 4895262 GACACGATCGACAACG-TCAAGAGCAAGATCCAGGACAAGGAAGGCATCCCGCCGGACCA 4895204
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || || |||| |||||||| || |||| || | || || ||| |||||| ||
Sbjct 4895203 ACAGCGCCTGATCTTTGCGGGCAAGCAATTGGAGGATGGCCGAACTCTCTCCGACTATAA 4895144
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| | ||||| || || ||| | | || | ||||||
Sbjct 4895143 CATCCAGAAGGAATCGACGCTCCACCTGGTGCTCAGATTACGCGGCGGC 4895095
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| | ||||| || || || || | || || || | |
Sbjct 4895094 ATGCAGATCTTTGTGAAAACTTTGACGGGAAAGACGATTACGCTGGAGGTGGAGAGCTCG 4895035
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || |||| ||||| || ||||| || |||||||
Sbjct 4895034 GACACGATCGACAACG-TCAAGAGCAAGATTCAGGACAAGGAAGGCATTCCGCCGGACCA 4894976
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || || |||| || ||||| ||| |||| |||| || || || ||||||||
Sbjct 4894975 ACAGCGCCTGATCTTTGCCGGCAAGCAGTTGGAAGACGGCCGGACGCTGTCTGACTACAA 4894916
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
||||||||||||| ||| || || | || ||||| ||| | ||||||
Sbjct 4894915 CATCCAGAAGGAGAGCACTCTACACTTGGTCTTGCGGTTGCGTGGCGGC 4894867
>seq7
Length=2048283
Score = 120 bits (132), Expect = 3e-22
Identities = 140/188 (74%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 40694 AAATA--TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751
||||| ||||| || || ||||||||||| ||||||||| |||| ||||| | ||||
Sbjct 21849 AAATAGCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGA 21908
Query 40752 CAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCA 40811
|| | | | ||||| || || | ||||| || |||||||| | ||||||||
Sbjct 21909 CACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCGCCTGACCAGCA 21968
Query 40812 ACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACAT 40871
|| | |||| ||| ||||| ||||| || |||| || || || | ||||||||||||
Sbjct 21969 GCGCTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGTACTCTGAGCGACTACAACAT 22028
Query 40872 CCAGAAGG 40879
||||||||
Sbjct 22029 CCAGAAGG 22036
>seq9
Length=3042725
Score = 105 bits (116), Expect = 7e-18
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| || ||||| || |||||||||| || || |||| ||| ||||| || || ||
Sbjct 1318836 GACAAGGAAGGCATTCCTCCGGACCAGCAGCGCCTGATCTTCGCTGGCAAGCAACTTGAA 1318777
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| ||||||||| ||||||||| ||||||||||| |||| || || || || |||
Sbjct 1318776 GACGGTCGCACCCTCTCCGACTACAATATCCAGAAGGAATCCACTCTCCACCTGGTCTTG 1318717
Query 40903 CGCTTGAGGGGCGGCG 40918
||| | | || ||||
Sbjct 1318716 CGCCTTCGCGGTGGCG 1318701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218659019840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |