Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq3 138 1e-27 seq4 105 6e-18 >seq3 Length=8560927 Score = 138 bits (152), Expect = 1e-27 Identities = 157/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || ||||| || || |||||||| ||||||| || || ||||||| Sbjct 4895342 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCATCCTCG 4895401 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || ||| | ||||| |||||||| |||||||| |||||||| ||||| Sbjct 4895402 AGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCCTGG 4895461 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| || ||||||||| | || | || ||| Sbjct 4895462 ATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTG 4895521 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 || |||| ||||| || || |||||||||| Sbjct 4895522 CCAGTCAAGGTTTTCACGAAGATCTGCATGG 4895552 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||||||||| | ||||| ||||| || || || || || ||||| || ||| Sbjct 4895096 CCGCCGCGTAATCTGAGCACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTCGGAG 4895155 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || |||||| | || || || || |||| || ||||| || || || || Sbjct 4895156 AGAGTTCGGCCATCCTCCAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGGG 4895215 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| |||||||| || || || || | |||| ||||| | ||| || Sbjct 4895216 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGGACGACTCAACT 4895275 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| || | ||| || || |||| ||||| || || ||||||||| Sbjct 4895276 TCGAGCGTGATCGTCTTCCCCGTCAAGGTTTTCACGAAGATCTGCATG 4895323 >seq4 Length=4919768 Score = 105 bits (116), Expect = 6e-18 Identities = 722/1136 (64%), Gaps = 44/1136 (4%) Strand=Plus/Plus Query 133222 GGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGA-TATACATTCGACGTGAAC 133280 |||| || ||||| || || ||||| || || || | |||| || | ||| |||||| | Sbjct 3841280 GGTTAACGACTTGGAATTCTCCGGCAAGGACACGGC-GAGAGTAGATATTTGACGTGTAT 3841338 Query 133281 GGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCC 133340 ||||||||| ||||||||||||| || ||||| | |||| || || ||||| || Sbjct 3841339 GGTTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCATAGGGGCG 3841398 Query 133341 ACCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTCCAGTCC 133400 || | || |||||| | ||||| | ||| || | | | ||| || ||| ||| Sbjct 3841399 ACAAGCAGAGAGTTGCGAACGCCATGTTTGGCAATCTCGGCTTTCAAGGAGTCCCAATCC 3841458 Query 133401 CACAGATTGTTGGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGCAAAATA 133460 ||||| || || || || ||||| |||||| ||| | ||||| Sbjct 3841459 CACAG---GTCCGAGGGAGTGA---CGTTCCACATGTCGTA-TTG-AAGAATGC------ 3841504 Query 133461 CCCCTGCTCACCGGACTGTCCGTGTACGATTCATAGGGTCCGTTGATTTTGGCCAGCTCG 133520 || || || || ||| || ||| | |||||||| ||| | ||||| || ||| Sbjct 3841505 CCTGTG-AGACGGGGCTGCCCTCGTATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCG 3841563 Query 133521 CAGCTAGCCTCCAAAGCGGCAAAGTAAATGGTTTCCGCGA-TTGAATAGTTGACGAACCT 133579 || || | ||| ||| |||||||||||| || ||||||| || | ||| Sbjct 3841564 CAAGAGGCAGTGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAATA-TTCAGTTGCCT 3841622 Query 133580 GGCATCGTCGCTATCGTAGGCGATGTCG-AGAAGAACAAACGCGTCGGCCAAACCCTGTA 133638 ||| ||| || ||| || | || ||| || || || ||||| | ||| || | Sbjct 3841623 GGCCTCGGGAGAGTCAAAGG-GAAGACGCAGAGCAAGGAAGGCATCGGCGAGACCTTGAA 3841681 Query 133639 TGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCGACTCGGCCGTGGGATAGT 133698 ||| | |||| || |||||| |||||| ||| | |||| |||||||| Sbjct 3841682 CGCCCAGACCGACAGGCCGATGTCGGAAGTTGCTCTTCTTTGCTTCGGGAACGGGATAGT 3841741 Query 133699 GGTTGACGTCGATGATCTTGTTGAGATTGCGGACGATAATTTTAGTCAAATGTTTCAGCA 133758 ||||| |||||||||||||| || ||||| || | || ||| | | | || Sbjct 3841742 AGTTGATATCGATGATCTTGTTTAGGTTGCGAGTGACCACTTGAGTTACCTCATGAAGAC 3841801 Query 133759 AAACATAGTCA-AATGTCTTGGCGTC-GACGTCGACGCACTTGTTGACGGCAATACTGGC 133816 | || ||||| | | | | | | | || || ||| | | || || | ||| Sbjct 3841802 GACCAAAGTCATATTCACCTCGAGCCTGA--TCCACGAAGGTAGGGAGAGCGAGGGAGGC 3841859 Query 133817 TAGATTACAAACGGCCGTCTCGTTCTCGTCGCAATACTGGACGATCTCGGCGCAGAGGTT 133876 ||||| || || || ||||| | | | | ||| ||||||| ||||||||| Sbjct 3841860 CAGATTGCACACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTCGGTGCAGAGGTT 3841919 Query 133877 GCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAGTTATTGCAATGATCCTTGTA 133936 || | |||||| ||||| || || || ||||| ||||||| |||||||| Sbjct 3841920 TGAGCTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTA 3841979 Query 133937 TAGCATGTACGGCCCGCCGGTTTCGACGTTGGTCTCGACGATAAATCTAAACA-AGTCTC 133995 |||||||| || || || ||| | | ||||| ||| | | | || || || Sbjct 3841980 AAGCATGTAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGAT--AGCATACCATAGCTTC 3842037 Query 133996 T-CGCCTTCACCTGCCTTTCGTACAC-TTGAGCATTTTCGTA-GTCGC-AATATCTCATT 134051 | ||||| ||| | || || ||| | | || ||||| || | | | || || Sbjct 3842038 TGGGCCTTAACC-GTCTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACAGTTCCTT 3842096 Query 134052 TCGAAATCAAAACCGTATTTGTCGGCGAGGTCAGGGCATGTTTTGTGAG---AGAATAGC 134108 ||| || || || ||| || || ||||| | | |||| |||| || Sbjct 3842097 --GAAGTCGTCGCCATAGACGTCAGCTAGACCAGGG---GCCTCATGAGGGCAGAAGAGT 3842151 Query 134109 GACCACATTTGATTGTTCTTTACGCGTTTCATGAATAGATCGGGAATCCACAGGCCGAGC 134168 | |||| ||| || |||| || |||| |||||| | || ||| |||||||| | Sbjct 3842152 GTCCACTCTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGCATAG 3842211 Query 134169 ATTAAATCGCGAGCTTTAGTGTCTTCGGAGCCCATGTTGCGTCTCAAGTTGAGAAACTCA 134228 | || ||||| ||| | ||||| ||| ||| || || ||| | || || Sbjct 3842212 AACAAGTCGCGTGCTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCG 3842271 Query 134229 TAAATTTCCGGATGCCACGGCTCGATGTAGGCGGCGAGGGCACCTTTTCGC---TTACCA 134285 ||| || | ||||| || |||| |||| ||| | ||||||| ||| ||||| Sbjct 3842272 AAAACGTCTGCGTGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCG 3842331 Query 134286 CCCTGGTCGACGTGACGCACCATGTTGTTGAAGACTCTCAACATATTGACGAGACC 134341 ||||||||||||| || | | ||||||||||| | | ||| || |||||| Sbjct 3842332 CCCTGGTCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACC 3842387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829955866128