Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq3 131 1e-25
seq7 107 1e-18
>seq3
Length=8560927
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| |||| || || |||| ||||| ||| || || ||||| ||||||||||| |||
Sbjct 4894868 CCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 4894927
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| ||| |||| |||||||||||||| || || || || ||||| ||||| ||
Sbjct 4894928 AGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGA 4894987
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||||| ||||| ||| | | | | |||| || | || ||
Sbjct 4894988 ATGCCTTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACC 4895047
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||| || || || || || | |||||||||||||||||||||
Sbjct 4895048 TCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCAT 4895094
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || |||||||| | || || ||||| |||||||||||| |
Sbjct 4895324 CCACCGCGGAGACGGAGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 4895383
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| ||| | || || | ||| ||||| ||||||||||| |||||||||||| ||
Sbjct 4895384 AGCGTCCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGA 4895443
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||| ||||| ||||| ||| | | | | || | ||| | || |||||
Sbjct 4895444 ATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACC 4895503
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| ||||| || | |||||||| |||||||||||
Sbjct 4895504 TCAAGAGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| | || ||||||||||| | || ||| ||||| ||||| ||||||||
Sbjct 4895096 CCGCCGCGTAATCTGAGCACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTCGGAG 4895155
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281
|| ||| | || ||||| |||||||| || || || || ||||| |||| || ||||
Sbjct 4895156 AGAGTTCGGCCATCCTCCAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGGG 4895215
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||||| ||||| ||| | | | | |||| |||| ||| || ||
Sbjct 4895216 -ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGGACGACTCAAC 4895274
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||| || || || || | |||||||| |||||||||||
Sbjct 4895275 TTCGAGCGTGATCGTCTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 4895322
>seq7
Length=2048283
Score = 107 bits (118), Expect = 1e-18
Identities = 134/181 (74%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
||||| |||||||||||| ||| |||| |||| || | ||||||||| ||||| ||
Sbjct 22034 TTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATC 21975
Query 34262 AGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGC 34320
| ||||||||||| | |||| | || |||||||| ||||| ||| | || | |
Sbjct 21974 AAGCGCTGCTGGTCAGGCGGG-ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTC 21916
Query 34321 TATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380
|||| |||| ||| ||||| || | |||||||| ||||| ||||| || || || ||
Sbjct 21915 GATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 21856
Query 34381 G 34381
|
Sbjct 21855 G 21855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071669255040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |