Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3 143 2e-29 >seq3 Length=8560927 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||| || | ||| | || |||||||| || |||||||||||||| ||||||||||| Sbjct 4894867 GCCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGA 4894926 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 ||| || |||| |||| || || ||||| || |||| ||||||||||| || || Sbjct 4894927 CAGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGG 4894986 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || ||||||||| ||| || ||| || | | ||||| | |||||| Sbjct 4894987 AATGCCTTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCAC 4895046 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| ||||||||||| ||||||| ||| ||||||||||| |||||| Sbjct 4895047 CTCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCATG 4895095 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||||||| ||||||||| |||||||||||| |||| || | || || Sbjct 4895342 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCATCCTCG 4895401 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| |||||||| || | ||||| ||||||||||| | ||||| |||||| Sbjct 4895402 AGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCCTGG 4895461 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||| ||||| | || || |||||| Sbjct 4895462 ATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTG 4895521 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || |||| || ||||| ||||| |||||| || Sbjct 4895522 CCAGTCAAGGTTTTCACGAAGATCTGCATGGTG 4895554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074795541764