Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4 387 1e-102
seq3 159 3e-34
seq7 107 2e-18
>seq4
Length=4919768
Score = 387 bits (428), Expect = 1e-102
Identities = 1242/1901 (65%), Gaps = 49/1901 (3%)
Strand=Plus/Plus
Query 22104 TCTTG-TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162
||||| || || || ||||| || | | | ||||| | ||||| ||||| ||||||
Sbjct 3840931 TCTTGATCGACAGTGAACTGGATAGGCTGGGTGGCCGCCATTGTGCGCAGATAGTACATG 3840990
Query 22163 CCCGTCTTCAGACCCATCTTCCA---CGCGTAAAAATGTATCGACGTCAATTTTCCATAA 22219
|| ||||| || ||||| ||||| |||| ||||| || || | || ||
Sbjct 3840991 CCGGTCTTGAGCCCCATTTTCCATCCCGCG---AAATGCATGCTAGTGATCTTGCCCATG 3841047
Query 22220 CTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCG 22279
|||| | || || | |||| ||||| ||||||||| || || || || ||
Sbjct 3841048 GTCGGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTGATCGATGAAGGCACCGCGGTCC 3841107
Query 22280 GCGGCCATATTTATCAATGTACGCATCGAC--ATTTCCCATACGGTCTTGTACAGTTGCC 22337
|| ||||| | | | ||| || | | | |||||||| |||||||| || ||
Sbjct 3841108 GCTGCCATTTGCAGGACTGTCCG--TTGGCTGATTTCCCACACGGTCTTATAGAGAGCTT 3841165
Query 22338 TGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAAT 22397
|||| ||| || || ||| |||||| || ||| | | |||||| ||
Sbjct 3841166 TGATGTCTGCGGGGATGTTGGGGATGTTCTGGATCGAGCCGCCTTCGGCTATGATTCGAT 3841225
Query 22398 TTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAG--ATGACGGTT 22455
| || || ||||| ||||| || | | | | ||| || | || ||| ||||
Sbjct 3841226 TCTTCATATTATCGGACCACAGGCCCAAGTCAACTAGATCCTTCAGCAACCATG--GGTT 3841283
Query 22456 CACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTC 22515
|| ||||| || || |||| | ||| ||||| ||| || || || ||| | |||||
Sbjct 3841284 AACGACTTGGAATTCTCCGGCAAGGACACGGCGAGAGTAGATATTTGACGTGTATGGTTC 3841343
Query 22516 GAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAG 22575
|||| |||| ||||| || || ||||||| |||||| || || ||||| || || | ||
Sbjct 3841344 GAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCATAGGGGCGACAAG 3841403
Query 22576 TAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTA-CTCTTGAGCA-TCGACCAGTCCCAC 22633
|| ||||| | | ||| || || | ||| | || | || | || ||| ||||||
Sbjct 3841404 CAGAGAGTTGCGAACGCCATGTTTGGCAATCTCGGCTTTCAAGGAGTC--CCAATCCCAC 3841461
Query 22634 AGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCG 22691
|| || || || || || || |||||| |||||||| | | ||| | || || |
Sbjct 3841462 AGGTCCGAGGGAGTGACGTT---CCACATGTCGTATTGAAGAATGCCCTGTGAGACG--G 3841516
Query 22692 GGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCA 22751
||||||| ||||| ||||| || | || | | ||| |||||||| || |
Sbjct 3841517 GGCTGCCCTCGTATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGAGGCAGTGA 3841576
Query 22752 ACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTT 22811
|| | | || || || || ||||||| | |||| || ||| || |
Sbjct 3841577 GAGCAGCATGGTAAATGGTTTCAAAGATTTGAATATTCAGTTGCCTGGCCTCGGGAGAGT 3841636
Query 22812 CGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCG 22871
| | || | ||||| | ||| || || || | ||| |||||||| | ||||| |
Sbjct 3841637 CAAAGGGAAGACGCAGAGCAAGGAAGGCATCGGCGAGACCTTGAACGCCCAGACCGACAG 3841696
Query 22872 GTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTG 22931
| || | | | || | ||||| ||||| | ||||| | || ||||||
Sbjct 3841697 GCCGATGTCGGAAGTTGCTCTTCTTTGCTTCGGGAACGGGATAGTAGTTGATATCGATGA 3841756
Query 22932 TTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAA 22991
| |||| | ||| | || || | || |||| ||||||| ||
Sbjct 3841757 TCTTGTTTAGGTTGCGAGTGACCACTTGAGTTACCTCATGAAGACGACCAAAGTCATATT 3841816
Query 22992 CGCC-CGAT--TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCA 23048
| || ||| || | || || | || |||| ||||| |||||||| || || |
Sbjct 3841817 CACCTCGAGCCTGATCCACGAAGGTAGGGAGAGCGAGGGAGGCCAGATTGCACACAGCGA 3841876
Query 23049 CCTCGTCTTTGGACGTGTAC--TCTACAATTTCGGTACATAGATTGCTACACTTT--ATC 23104
||||||| ||| |||| || ||||| ||||| || || || | ||| ||
Sbjct 3841877 CCTCGTCA--GGAGCTGTAAATTCGACAATCTCGGTGCAGAGGTT--TGAGCTTCGGATG 3841932
Query 23105 GTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGC 23164
|| ||||| || |||||||||| |||| |||||| | |||||||| |||||||| ||
Sbjct 3841933 GTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATGTAGGGG 3841992
Query 23165 GTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGT 23224
|| || |||||| ||| | ||||| ||| || ||| | |||| || | ||| |||
Sbjct 3841993 GTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCATAGCTTCTGGGCCTTAAC-CGT 3842051
Query 23225 CGCACGT--ACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGT 23282
| || || | ||| |||| ||||| | | ||||| | | || ||| | || |
Sbjct 3842052 CTGGCGACCACGTCCCTCCTTC-TCGTATCTCTCGTACAGTTCCTTGAAGTCGTCGCCAT 3842110
Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATC-GGACACATGAGACTCCACATTGAGTCATTT 23341
| ||| || || || || | | ||| || || | ||| ||||| | || ||
Sbjct 3842111 AGACGTCAGCTAGACCAGGGGCCT-CATGAGGGCAGAAGAGTGTCCACTCTTGGTTCTTC 3842169
Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401
|| || ||| ||| || | || || |||| || || ||||||| ||||| || |
Sbjct 3842170 TCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGCGTGCTCTG 3842229
Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461
||||| || |||||| ||||||| || | ||| ||||| || ||||| || |||||
Sbjct 3842230 ACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACGTCTGCGTGCCAT 3842289
Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521
|| |||||||| | |||||| || || || | ||| || |||||||| |||||||| ||
Sbjct 3842290 GGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACGTAGCGA 3842349
Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581
|| || |||||| | || | ||||| || | |||||| ||||| | ||| ||
Sbjct 3842350 GCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTGGTCCCT 3842409
Query 23582 GCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGAT 23641
|| | | || ||| | || |||| | || | | || || || |||||| | |
Sbjct 3842410 GCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTGAGGCCAATACCTCCGGCAGTC 3842469
Query 23642 TTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTG 23701
|| || ||||| || || || |||||||| |||||||||||||||||||| |||||
Sbjct 3842470 TTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATGCTGTCTTCTTTC 3842529
Query 23702 GTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTC 23761
| | | |||||| || || |||| || | || || || |||| |||||| ||
Sbjct 3842530 ATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGAACAGCGTG 3842589
Query 23762 GGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCA 23821
|| ||||| || ||| | | ||||| || ||||| || || || || |||
Sbjct 3842590 GGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCAATAGCCTTTTCA 3842649
Query 23822 ATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC--TCT-CG 23878
| ||| || || || ||||| | || || ||||| | ||||| ||| || | ||| ||
Sbjct 3842650 ACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTGGGGACGTTCTGCG 3842709
Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938
| | || || ||| |||| || ||||| | | || ||| || || ||||||||
Sbjct 3842710 A-CTTGCTTCC--CAATCTTGAGGAGGTATGATCTCTCCAACGTCTTGAAGCCAAAATAT 3842766
Query 23939 TCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979
| |||||| ||||| || |||| || || || ||||| ||
Sbjct 3842767 TGATAGTTGAAGTCTCGGTCGTAGACAATTGCAGAATTGAA 3842807
>seq3
Length=8560927
Score = 159 bits (176), Expect = 3e-34
Identities = 348/511 (68%), Gaps = 24/511 (5%)
Strand=Plus/Plus
Query 57804 ATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAAC 57863
|| || ||| | ||||| || ||||| || ||||| || ||||| |||||||| |
Sbjct 3180496 ATGGAGAACATCCATTCGGAGATGTACAGCCTTCTCATTGACACGTATGTGAAGGATCCC 3180555
Query 57864 GACGAGAA-ACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGG 57921
| ||||| || || || || |||| || || ||||| || || |||| ||||| |
Sbjct 3180556 AAAGAGAAGACATAT-CTCTTTGACGCCATTGACACAATCCCATGCATTCGC-AAGAAAG 3180613
Query 57922 CAGAGTGGTCAATCAAATGGAT-----AAAAAGCGCCACGGCCACGTTCGCCGAGAGGCT 57976
|||| ||| | | |||||| | |||| | | | || ||| || || |
Sbjct 3180614 CAGACTGGGCTTTGCGATGGATCGCAGATAAAGAGTCGAGC-----TTTGCCCAGCGGTT 3180668
Query 57977 AATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTG 58036
| | || || || ||||||||||| || ||||| || || |||||| || || || ||
Sbjct 3180669 AGTTGCTTTTGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCAGCGATCTTCTG 3180728
Query 58037 GATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGA 58096
| | |||| ||||||||||||||||| || || ||||||| | || || || ||
Sbjct 3180729 GCTCAAGAGCAAGGGCCTGATGCCCGGCCTCACTTTCTCCAACGAGCTTATCTCCCGTGA 3180788
Query 58097 CGAGGGTCTCCATACTGATTTTGCGTGCC---TAATGTACTCTCACATTGTCAATAAACC 58153
|||||| | ||||| || ||||| |||| | ||| | || || || || ||
Sbjct 3180789 TGAGGGTATGCATACGGACTTTGCATGCCTCTTGATGCAACATCTCA--AGCACAAACCC 3180846
Query 58154 GACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGT 58213
||| | | | |||| ||||||||||||| || ||| ||| ||||| |||||| |
Sbjct 3180847 GAC-CCAAAACTCATCGAAAACATTATCACCGAAGCTGTCAAGATTGAAAAAGAGTTTCT 3180905
Query 58214 CACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAA--CAATGATTTGATGTCAAAGTAC 58271
|||||| ||||| || || | || | || ||||| | | | | |||||| |||
Sbjct 3180906 CACCGATGCCCTCCCCGTCTCATTGTTGGGCATGAATTCGAAGCTCATGTGTCAA--TAC 3180963
Query 58272 ATTGAGTTTGTTGCCGACAGACTTTTGCTCG 58302
|| |||||||| |||||| | || | ||||
Sbjct 3180964 ATCGAGTTTGTCGCCGACCGCCTGCTCCTCG 3180994
Score = 120 bits (132), Expect = 3e-22
Identities = 167/231 (72%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| || || |||| || || |||||||| |||| ||||| ||||
Sbjct 4895323 CATGCAGATCTTCGTGAAAACCTTGACGGGGAAGACGATCACGCTCGAAGTTGAGTCGTC 4895264
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGA 31308
||||| |||| | ||||| ||| || | | ||||||||||||| | ||||| ||
Sbjct 4895263 CGACACGATCGACAACGTCAA---GAGCAAGATCCAGGACAAGGAAGGCATCCCGCCGGA 4895207
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
||| ||||| || || || || ||||| || ||||| || ||| | ||| ||
Sbjct 4895206 CCAACAGCGCCTGATCTTTGCGGGCAAGCAATTGGAGGATGGCCGAACTCTCTCCGACTA 4895147
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||||| || || |||||||| || || ||||| || ||| | | |||||
Sbjct 4895146 TAACATCCAGAAGGAATCGACGCTCCACCTGGTGCTCAGATTACGCGGCGG 4895096
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| || || |||| ||||| || ||||| | || || || |
Sbjct 4895551 CATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAG 4895492
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| |||| | ||||| | || |||||| || ||| | || ||||||||
Sbjct 4895491 CGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCTCCCGACCA 4895432
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || ||||| ||||||||| | || || ||| ||||||| || ||
Sbjct 4895431 GCAGCGCCTCATTTTCGCCGGCAAACAGCTCGAGGATGGCCGGACGCTGAGCGACTACAA 4895372
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || ||||| || || ||||| ||
Sbjct 4895371 CATCCAGAAGGAGTCGACGCTGCACCTGGTCCT 4895339
>seq7
Length=2048283
Score = 107 bits (118), Expect = 2e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261
||||| ||||| || || ||||| || |||||| |||| || || ||||||||| ||
Sbjct 21856 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 21915
Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
|| | ||||| | || ||||||||||||| | ||||| ||||||||||| |
Sbjct 21916 GACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCGCCTGACCAGCAGCGCTTG 21975
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| ||||| ||||| ||| | |||||| ||| ||||||| || ||||| || ||
Sbjct 21976 ATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGTACTCTGAGCGACTACAACATCCAGAA 22034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765931945280
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