Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq4 104 5e-17 seq3 104 5e-17 >seq4 Length=4919768 Score = 104 bits (114), Expect = 5e-17 Identities = 174/249 (70%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 ||||| ||||||||||| || || || ||| ||||| ||||| || ||||| ||| Sbjct 3842458 CCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATG 3842517 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGA-CTGTTCCACA 94910 || || |||| | | | | | |||||| ||||| || || ||| ||| |||||| Sbjct 3842518 CTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGT-TGAGGTGTTCCGGC 3842576 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 ||| ||||| ||||| ||||| ||||| || | | | |||||||| | || || || Sbjct 3842577 ATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTC 3842636 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 ||| | || | ||| || ||||| || || ||||||||||| | ||||| || Sbjct 3842637 AATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTG 3842696 Query 95031 AGGGCGCTC 95039 || || || Sbjct 3842697 GGGACGTTC 3842705 >seq3 Length=8560927 Score = 104 bits (114), Expect = 5e-17 Identities = 214/315 (68%), Gaps = 5/315 (2%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 ||||| ||||| || || ||||| |||||||| ||| | || ||| | || |||||| Sbjct 3180670 GTTGCTTTTGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCAGCGATCTTCTGG 3180729 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 |||||| || ||| | |||| || ||||| | |||||| ||| | || || | || Sbjct 3180730 CTCAAGAGCAAGGGCCTGATGCCCGGCCTCACTTTCTCCAACGAGCTTATCTCCCGTGAT 3180789 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 || ||| | ||| |||||||||||| | || || || | | | | |||| | Sbjct 3180790 GAGGGTATGCATACGGACTTTGCATGCCTCTTGATGCAACA-TCTCAAGCACAAACCCGA 3180848 Query 102098 TCAAGAGAAAGGATTCTTGAA-ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156 | | ||| || || ||| |||| ||||| ||| |||||| |||| ||||| Sbjct 3180849 CCCA---AAACTCATCGAAAACATTATCACCGAAGCTGTCAAGATTGAAAAAGAGTTTCT 3180905 Query 102157 CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACAT 102216 ||| | | |||| || || ||| |||| ||||| | ||| | ||| | || ||||| Sbjct 3180906 CACCGATGCCCTCCCCGTCTCATTGTTGGGCATGAATTCGAAGCTCATGTGTCAATACAT 3180965 Query 102217 TGAATTTGTGGCAGA 102231 || ||||| || || Sbjct 3180966 CGAGTTTGTCGCCGA 3180980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582934960220