Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq4 104 5e-17
seq3 104 5e-17
>seq4
Length=4919768
Score = 104 bits (114), Expect = 5e-17
Identities = 174/249 (70%), Gaps = 2/249 (1%)
Strand=Plus/Plus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
||||| ||||||||||| || || || ||| ||||| ||||| || ||||| |||
Sbjct 3842458 CCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATG 3842517
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGA-CTGTTCCACA 94910
|| || |||| | | | | | |||||| ||||| || || ||| ||| ||||||
Sbjct 3842518 CTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGT-TGAGGTGTTCCGGC 3842576
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
||| ||||| ||||| ||||| ||||| || | | | |||||||| | || || ||
Sbjct 3842577 ATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTC 3842636
Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030
||| | || | ||| || ||||| || || ||||||||||| | ||||| ||
Sbjct 3842637 AATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTG 3842696
Query 95031 AGGGCGCTC 95039
|| || ||
Sbjct 3842697 GGGACGTTC 3842705
>seq3
Length=8560927
Score = 104 bits (114), Expect = 5e-17
Identities = 214/315 (68%), Gaps = 5/315 (2%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||| ||||| || || ||||| |||||||| ||| | || ||| | || ||||||
Sbjct 3180670 GTTGCTTTTGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCAGCGATCTTCTGG 3180729
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
|||||| || ||| | |||| || ||||| | |||||| ||| | || || | ||
Sbjct 3180730 CTCAAGAGCAAGGGCCTGATGCCCGGCCTCACTTTCTCCAACGAGCTTATCTCCCGTGAT 3180789
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|| ||| | ||| |||||||||||| | || || || | | | | |||| |
Sbjct 3180790 GAGGGTATGCATACGGACTTTGCATGCCTCTTGATGCAACA-TCTCAAGCACAAACCCGA 3180848
Query 102098 TCAAGAGAAAGGATTCTTGAA-ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCT 102156
| | ||| || || ||| |||| ||||| ||| |||||| |||| |||||
Sbjct 3180849 CCCA---AAACTCATCGAAAACATTATCACCGAAGCTGTCAAGATTGAAAAAGAGTTTCT 3180905
Query 102157 CACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACAT 102216
||| | | |||| || || ||| |||| ||||| | ||| | ||| | || |||||
Sbjct 3180906 CACCGATGCCCTCCCCGTCTCATTGTTGGGCATGAATTCGAAGCTCATGTGTCAATACAT 3180965
Query 102217 TGAATTTGTGGCAGA 102231
|| ||||| || ||
Sbjct 3180966 CGAGTTTGTCGCCGA 3180980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989582934960220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |