Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq4 149 8e-31
>seq4
Length=4919768
Score = 149 bits (164), Expect = 8e-31
Identities = 349/525 (66%), Gaps = 4/525 (1%)
Strand=Plus/Plus
Query 63378 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63437
||||| ||||| | ||| ||||| | | || || || ||||| || ||||| || | |
Sbjct 3842284 TGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACG 3842343
Query 63438 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTG 63497
|| | ||| || || || | || | | ||| || || | ||| || || | ||||||
Sbjct 3842344 TAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTG 3842403
Query 63498 GTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCC 63555
|| || | |||||| ||| |||||||||| | | ||||| | || || || |
Sbjct 3842404 GTCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTGA--GGCCAATACCTC 3842461
Query 63556 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTAT 63615
| || | || || || | || || || | |||||||||||||| || ||||| |
Sbjct 3842462 CGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATGCTGT 3842521
Query 63616 CATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAA 63675
| || |||||| | | || ||| |||| || | ||| ||||| ||||| |
Sbjct 3842522 CTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGA 3842581
Query 63676 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63735
| | || || |||||||| || || || || | || | || ||||| ||||||||||
Sbjct 3842582 ACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCAATAG 3842641
Query 63736 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63795
| || | || |||||| || ||||| |||||||| | |||||| || || |
Sbjct 3842642 CCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTGGGGAC 3842701
Query 63796 TTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 63855
||| | | || || || || | | ||| ||| | ||||| || || || ||||
Sbjct 3842702 GTTCTGCGACTTGCTTCCCAATCTTGAGGAGGTATGATCTCTCCAACGTCTTGAAGCCAA 3842761
Query 63856 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGA 63900
|||| | || |||||||| ||||| | ||| | |||||||
Sbjct 3842762 AATATTGATAGTTGAAGTCTCGGTCGTAGACAATTGCAGAATTGA 3842806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816938691520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |