Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq4 156 6e-33 >seq4 Length=4919768 Score = 156 bits (172), Expect = 6e-33 Identities = 357/533 (67%), Gaps = 6/533 (1%) Strand=Plus/Plus Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230 ||||| ||||| | ||| ||||| | | || || || ||||| || ||||| || | | Sbjct 3842284 TGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACG 3842343 Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290 || | ||| || || || | || | | ||| || || | ||||||||| || |||||| Sbjct 3842344 TAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTG 3842403 Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATTCCCC 66348 ||||| | |||||| ||| | |||||||| | | |||| || || || || | Sbjct 3842404 GTCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTG--AGGCCAATACCTC 3842461 Query 66349 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 66408 | || | || || || | || || || | || |||||||||||||| || || | Sbjct 3842462 CGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATGCTGT 3842521 Query 66409 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 66468 | || |||||| | | || ||| |||| || | || ||||| ||||| | Sbjct 3842522 CTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGA 3842581 Query 66469 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 66528 | | || || |||||||| || || || || | || | || ||||| |||||||||| Sbjct 3842582 ACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCAATAG 3842641 Query 66529 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 66588 | || | || |||||| || ||||| |||||||| | |||||| || || | Sbjct 3842642 CCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTGGGGAC 3842701 Query 66589 TTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 66647 ||| ||| |||| || || || | | ||| ||| | ||||| || || || ||| Sbjct 3842702 GTTCTGCGA-CTTGCTTCCCAATCTTGAGGAGGTATGATCTCTCCAACGTCTTGAAGCCA 3842760 Query 66648 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 66700 ||||| | || |||||||| ||||| | ||| | || |||| || ||| Sbjct 3842761 AAATATTGATAGTTGAAGTCTCGGTCGTAGACAATTGCAGAATTGAATTCATC 3842813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172108918560