Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 1e-20
>seq3
Length=8560927
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| || || | ||| | || | ||| | ||| ||||| || || ||||| || |||||
Sbjct 4895323 GCCACCGCGGAGACGGAGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 4895382
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
|| || | || ||||||||||| || || | || || || ||||| ||||||||
Sbjct 4895383 CAGCGTCCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGG 4895442
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| |||||||| ||| || || | | || | |||||| ||| ||| ||
Sbjct 4895443 AATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGAC 4895502
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||| || | |||||||| ||||| ||||| ||||| || |||||
Sbjct 4895503 CTCAAGAGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550
Score = 98.7 bits (108), Expect = 1e-15
Identities = 275/419 (66%), Gaps = 15/419 (4%)
Strand=Plus/Plus
Query 52535 ACGCTTTTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCG 52594
|||| |||||| | || || | ||||| || | || ||||| ||| ||||||||
Sbjct 3180578 ACGCCATTGACACAATCCCATGCATTCGCAAGAAAGCAGACTGGGCTTTGCGATGGATCG 3180637
Query 52595 AAAACGACAAAG---CCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTG 52651
| || |||| | | |||||| | || | || || ||||| || |||||
Sbjct 3180638 CA---GATAAAGAGTCGAGCTTTGCCCAGCGGTTAGTTGCTTTTGCAGCCGTCGAAGGCA 3180694
Query 52652 TGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAAAACCTTGGGCATAATGCCCG 52711
| || || || || ||||| || || || | |||| | | |||| | |||||||
Sbjct 3180695 TCTTCTTCTCTGGATCCTTTGCAGCGATCTTCTGGCTCAAGAGCAAGGGCCTGATGCCCG 3180754
Query 52712 GCCTCACGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGT 52771
||||||| || ||||||| | || || || || || || ||||| || || ||||| |
Sbjct 3180755 GCCTCACTTTCTCCAACGAGCTTATCTCCCGTGATGAGGGTATGCATACGGACTTTGCAT 3180814
Query 52772 GTTTGTATTATAATACGCGCGTTAAAGAAAAATTGTCATATGAAAAAATTCTAGA---CA 52828
| | | | || | | ||| | || | | |||| | | || ||
Sbjct 3180815 GCCTCT----TGATGCAACATCTCAAGCACAAAC--CCGACCCAAAACTCATCGAAAACA 3180868
Query 52829 TGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCAT 52888
| | | || || ||| | ||||||||||||||| | || || || | ||||| ||||
Sbjct 3180869 TTATCACCGAAGCTGTCAAGATTGAAAAAGAGTTTCTCACCGATGCCCTCCCCGTCTCAT 3180928
Query 52889 TGTTGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTG 52947
||||||||||||| ||| | ||||| | |||||||||||||| || ||| | |||
Sbjct 3180929 TGTTGGGCATGAATTCGAAGCTCATGTGTCAATACATCGAGTTTGTCGCCGACCGCCTG 3180987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063479132800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |