Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4 183 4e-41 >seq4 Length=4919768 Score = 183 bits (202), Expect = 4e-41 Identities = 1178/1859 (63%), Gaps = 45/1859 (2%) Strand=Plus/Plus Query 78748 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTC 78807 || || ||||||||||| || || || || || | ||||||| ||||||||| || Sbjct 3840973 GTGCGCAGATAGTACATGCCGGTCTTGAGCCCCATTTTCCATCCCGCGAAATGCATGCTA 3841032 Query 78808 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 78867 || | ||| |||| || | || || || | ||| || ||||||||| Sbjct 3841033 GTGATCTTGCCCATGGTCGGTTCCTTCAAGTGAATGTTGAGAGACTGGGACTGATCGATG 3841092 Query 78868 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 78927 ||||| || | ||| || ||||||| | || ||| ||| |||||||| | || Sbjct 3841093 AAGGCACCGCGGTCCGCTGCCATTTGCAGGACTGTCCGTTGGCTGATTTCCCACACGGTC 3841152 Query 78928 TTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCT 78984 ||||| | || || ||| | || | ||| | | ||||| || || || || || Sbjct 3841153 TTATAGAGAGCTTTGATGTCTGCGGGGATGTTGGGGATGTTCTGGATCGAGCCGCCTTCG 3841212 Query 78985 GCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 79044 || || || | |||||| || | || ||| | || || | | | || Sbjct 3841213 GCTATGATTCGATTCTTCATATTATCGGACCACAGGCCCAAGTCAACTAGATCCTTCAGC 3841272 Query 79045 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 79104 | || ||||| ||||| |||||||| | | || | |||| ||| ||||| Sbjct 3841273 AACCATGGGTTAACGACTTGGAATTCTCCGGCAAGGACACGGCGAGAGTAGATATTTGAC 3841332 Query 79105 GTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATA 79164 || |||||||| | |||| || || || | ||| |||| || || || || |||||| Sbjct 3841333 GTGTATGGTTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCATA 3841392 Query 79165 GGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATT 79222 || || || | | | || | || || ||| | | || | |||| | || | Sbjct 3841393 GGGGCGACAAGCAGAGAGTTGCGAACGCC--ATGTTTGGCAATCTCGGCTTTCAAGGAGT 3841450 Query 79223 CCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACC--GTT 79280 |||||||||| || || || || || ||||| | || ||||| ||||| || || Sbjct 3841451 CCCAATCCCACAGGTCCGAGGGAGTGACGTTCCACATGTCGTATTGAAGAATGCCCTGTG 3841510 Query 79281 ACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACT 79340 | | | || ||| |||||||||||| | ||| | || | ||| | ||| ||| Sbjct 3841511 AGACGGGGCTGC-CCTC-GTATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGA 3841568 Query 79341 CGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTT 79399 || | || | | ||||||||||| || || | |||| || | | || || | Sbjct 3841569 GGCAGTGAGAGCAGCATGGTAAATGGTTTCAAAGATTTGAATATTCAGTTGCCTG-GCCT 3841627 Query 79400 CTAGGCTATCAAATGGATAATTTAAGAG-AATAAACGCGTCTGCTAATCCTTGAACACCA 79458 | | ||||| ||| | | ||| || || || || || | |||||||| || Sbjct 3841628 CGGGAGAGTCAAAGGGAAGACGCA-GAGCAAGGAAGGCATCGGCGAGACCTTGAACGCCC 3841686 Query 79459 ATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTA 79518 | ||||| ||| | ||||| || | | ||||| |||| ||||| || || Sbjct 3841687 AGACCGACAGGCCGATGTCGGAAGTTGCTCTTCTTTGCTTCGGGAACGGGATAGTAGTTG 3841746 Query 79519 ATATCTATAATTTTATTGAGATTCCTGACT-ATTACTTTGACCACATCCTTTAGTTTGAG 79577 ||||| || || || || || || | || | | |||| || || | || Sbjct 3841747 ATATCGATGATCTTGTTTAGGTTGC-GAGTGACCACTTGAGTTACCTCATGAAGACGACC 3841805 Query 79578 AAAATCAAAT---CGTCCATCT--ATT-ACAAACATGTTCAACGCGACAGATGCCAGATT 79631 ||| ||| || | || | | || || || | | |||| || |||||||| Sbjct 3841806 AAAGTCATATTCACCTCGAGCCTGATCCACGAAGGTAGGGAGAGCGAGGGAGGCCAGATT 3841865 Query 79632 ACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACA 79691 || || || ||||| | || | | | | ||| | || || ||||||||||| | Sbjct 3841866 GCACACAGCGACCTCGTCAGGAGCTGTAAATTCGACAATCTCGGTGCAGAGGTT--TGAG 3841923 Query 79692 CTTA--ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 79749 ||| ||||| || || || | || || |||||| | || || || ||||| ||||| Sbjct 3841924 CTTCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGC 3841983 Query 79750 ATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 79809 ||| | || || ||||| || |||| | || | || || | ||| | | || | | Sbjct 3841984 ATGTAGGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCATA-GCTTCTGGGC 3842042 Query 79810 TTTATTATAGACTTGT-ATCTCTTTTCTCTTTC--GTAT-TGT-GTATATAATCGTTCGA 79864 ||| | | || | | | | | ||| ||| |||| | | ||| | || || || Sbjct 3842043 CTTA--ACCGTCTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACAGT-TCCTT-GA 3842098 Query 79865 ACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACT 79924 | ||||| || | || || ||| ||||| || | ||| || | | | ||||| Sbjct 3842099 AGTCGTCGCCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGAGTGTCCACT 3842158 Query 79925 CTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGA 79983 || | | || || |||| ||| || | |||||| |||| || || ||| || | Sbjct 3842159 CTTGGTTCTTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGC-ATAGAACAAG 3842217 Query 79984 TCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 80043 || | | ||| ||| || || || |||||| || | | ||| | | || Sbjct 3842218 TCGCGTGCTCTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACG 3842277 Query 80044 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGA 80103 || | ||||| ||||| | ||| ||||| | | || || || ||||| || ||||| Sbjct 3842278 TCTGCGTGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGG 3842337 Query 80104 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA 80163 || | ||| | ||| || || || | || | | ||| || || | ||||||||| || Sbjct 3842338 TCGACGTAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTG 3842397 Query 80164 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTA 80221 ||||||||||| | |||||| ||| |||||||||| | | |||| || || | Sbjct 3842398 CCATTGGTCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTG--AGGCCAA 3842455 Query 80222 TTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTA 80281 | || || || | || || || | || || || | || |||||||||||||| | Sbjct 3842456 TACCTCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGA 3842515 Query 80282 TGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCG 80341 |||| || || |||||| | | || ||| |||| || | || ||||| | Sbjct 3842516 TGCTGTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGG 3842575 Query 80342 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT 80401 |||| || | || || |||||||| || || || || | |||| || ||||| |||| Sbjct 3842576 CATTGAACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCT 3842635 Query 80402 CAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCT 80461 ||||||| ||| | || |||||| || || || |||||||| | |||||| | Sbjct 3842636 CAATAGCCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTT 3842695 Query 80462 GAGGTCTTTCAACGATCTTG-TTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTA 80520 | || | ||| ||| |||| || || || | | ||| ||| | ||||| || || Sbjct 3842696 GGGGACGTTCTGCGA-CTTGCTTCCCAATCTTGAGGAGGTATGATCTCTCCAACGTCTTG 3842754 Query 80521 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 80579 || |||||||| | || |||||||| ||||| | ||| | || |||| || ||| Sbjct 3842755 AAGCCAAAATATTGATAGTTGAAGTCTCGGTCGTAGACAATTGCAGAATTGAATTCATC 3842813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268045817760