Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq3 145 1e-29
>seq3
Length=8560927
Score = 145 bits (160), Expect = 1e-29
Identities = 348/519 (67%), Gaps = 17/519 (3%)
Strand=Plus/Plus
Query 125244 TTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTAC 125303
|||||| ||||||| |||||| | || ||||| |||||| || ||||||| |||
Sbjct 3180484 TTCCAAGTCATGATGGAGAACATCCATTCGGAGATGTACAGCCTTCTCATTGACACGTAT 3180543
Query 125304 ATTCGCGATCCGCAACGTAAACACATG-CTCTTTAACGCAATCGACACGGTGCCGTCTAT 125362
| ||||| ||| | || |||| |||||| |||| || ||||| | || | ||
Sbjct 3180544 GTGAAGGATCC-CAAAGAGAAGACATATCTCTTTGACGCCATTGACACAATCCCATGCAT 3180602
Query 125363 ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGA 125422
|| || || || | |||| | || ||||||| || | |||| | ||| |
Sbjct 3180603 TCGCAAGAAAGCAGACTGGGCTTTGCGATGGATCGCAGATAAAGAGTCGAGCTTTGCCCA 3180662
Query 125423 CAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCAT 125482
| | || || || || ||||| || ||||||||||| || || ||||| || ||
Sbjct 3180663 GCGGTTAGTTGCTTTTGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCAGCGAT 3180722
Query 125483 CTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATC 125542
||| |||||||||| || || |||||||| || || | |||||| |||| ||
Sbjct 3180723 CTTCTGGCTCAAGAGCAAGGGCCTGATGCCCGGCCTCACTTTCTCCAACGAGCTTATCTC 3180782
Query 125543 TCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCC 125602
|| || ||||| | || ||||||| ||| | || | ||||| ||||
Sbjct 3180783 CCGTGATGAGGGTATGCATACGGACTTTG-CATGCCTCT-TGATGCAAC-ATCT------ 3180833
Query 125603 CGAGTGCAGATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGGAT 125659
| || || | | ||| ||| ||||| |||||| | ||||| || || | |||
Sbjct 3180834 CAAGCACAAACC---CGACCCAAAACTCATCGAAAACATTATCACCGAAGCTGTCAAGAT 3180890
Query 125660 AGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCT 125719
||| |||||||||| ||||| |||| || ||| || | |||||||| | |||||
Sbjct 3180891 TGAAAAAGAGTTTCTCACCGATGCCCTCCCCGTCTCATTGTTGGGCATGAATTCGAAGCT 3180950
Query 125720 AATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACT 125758
||||| | ||||| |||||||| || || || || ||
Sbjct 3180951 CATGTGTCAATACATCGAGTTTGTCGCCGACCGCCTGCT 3180989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058421887840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |