Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 1e-18
>seq3
Length=8560927
Score = 109 bits (120), Expect = 1e-18
Identities = 143/193 (74%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| || || |||||||| || || | |||||||| | || || || |||||
Sbjct 4894904 TCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAG 4894963
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATT 104487
|| || | |||||| || || || || ||||| || ||||||||| ||||| || || ||
Sbjct 4894964 ATCAGGCGCTGTTGGTCCGGCGGAATGCCTTCCTTGTCCTGAATC-TTGCTCTTGACGTT 4895022
Query 104488 TTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTA 104546
|| | || || | || | || ||||| || ||||| ||||| || || | ||||| |
Sbjct 4895023 GTCGATCGTGTC-CGAGCTCTCCACCTCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCA 4895081
Query 104547 CAAATATCTGCAT 104559
|||| ||||||||
Sbjct 4895082 CAAAGATCTGCAT 4895094
Score = 89.7 bits (98), Expect = 1e-12
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 269133 GGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCT 269192
|||||||||||||||| || || ||||| || ||||| || || || ||||| || ||||
Sbjct 3180665 GGTTAGTTGCTTTTGCAGCCGTCGAAGGCATCTTCTTCTCTGGATCCTTTGCAGCGATCT 3180724
Query 269193 TTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGA 269241
| ||| | |||| | ||||| ||||| || | |||||||| |||||
Sbjct 3180725 TCTGGCTCAAGAGCAAGGGCCTGATGCCCGGCCTCACTTTCTCCAACGA 3180773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397160807472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |