Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq6 107 2e-18 >seq6 Length=1908156 Score = 107 bits (118), Expect = 2e-18 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 5332 CTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGCAC 5391 |||||| || | ||| |||||||| |||||||||||| | | | ||| || |||| Sbjct 1748142 CTGAGCAATGCGGTCGCCCTTCTTCACCTCAAAGTCGACCTCGCTGTGGTTGAAGAGCAG 1748083 Query 5392 CACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTG 5451 ||| ||| | |||| |||||| |||| || ||||| || ||| |||||||||||| Sbjct 1748082 GACCTTGACCTCCCCTCTGTAGTCCGCGTCAATGACGCCGGCTCCCGTGTCGATAAAGTG 1748023 Query 5452 TTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTA 5490 ||| | || ||||| || || || |||||||| ||||| Sbjct 1748022 TTTTGCAGCGAGGCCCGATCGAGGCGCTATGCGACCGTA 1747984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447749929862080