Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq17 93.3 5e-14 >seq17 Length=207847 Score = 93.3 bits (102), Expect = 5e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 19352 AAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGT 19411 ||| | ||| | || || ||||| ||||| ||| || ||| || |||||| |||| Sbjct 139892 AAAGTGCCTCAGATCGGCGATAAATTTGCATCTCGCCATGGTCAGAAGGGCACAATTGGT 139833 Query 19412 ATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATT 19471 || | || ||||| || |||||||||||||| ||| || || ||||| ||||| ||| Sbjct 139832 ATCACGTACCGTCACGAGGATATGCCTTTTACACGAGAAGGCATTGTGCCCGATCTGATT 139773 Query 19472 ATTAACCCACATGCTTTTCCAAGTCGAATGACGCTT 19507 || ||||| || || |||| ||| |||||| || Sbjct 139772 ATCAACCCGCACGCCATTCCCTCTCGCATGACGATT 139737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871374334400