Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq3 125 6e-24
>seq3
Length=8560927
Score = 125 bits (138), Expect = 6e-24
Identities = 157/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||||| || || ||||| || | ||| || ||||||| || | ||||||
Sbjct 4895342 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCATCCTCG 4895401
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
|||||||| ||| | || || | | ||||| || |||||||| || |||||||| |
Sbjct 4895402 AGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCCTGG 4895461
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTT 94976
|| || | ||||||| | ||| ||||| || ||| ||||| |||| |||||||| |
Sbjct 4895462 ATCTTGGACTTGACGTTGTCGATGGTGTC-GC-TGGACTCGACCTCAAGAGTGATGGTCT 4895519
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
| ||||| | |||||||| ||||||||||||
Sbjct 4895520 TGCCAGTCAAGGTTTTCACGAAGATCTGCATG 4895551
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || | ||| ||||| |||||||| | ||| ||||| || | ||| || || |
Sbjct 4894868 CCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 4894927
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || | || |||| ||| || ||| ||||||| | | || || || || |||
Sbjct 4894928 AGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGA 4894987
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| ||||| | ||| || ||||||| | ||| ||||| | | || ||
Sbjct 4894988 ATGCCTTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACC 4895047
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| | ||| || || ||||| || | |||||||||||||||||||||||
Sbjct 4895048 TCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCATGC 4895096
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 94790 AATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTG 94849
|||| | ||||| ||| | || |||||||| || | |||||| ||| | ||| |
Sbjct 4895105 AATCTGAGCACCAGGTGGAGCGTCGATTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGG 4895164
Query 94850 GAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909
|||||||| || || || ||||||| | | || || || || || || |||||
Sbjct 4895165 CCATCCTCCAATTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCC 4895224
Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969
||||| | || || ||||||| | ||| ||||| | || || || | ||||
Sbjct 4895225 TTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCGGACGACTCAACTTCGAGCGTG 4895284
Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || || || || | |||||||| |||||||||||||
Sbjct 4895285 ATCGTCTTCCCCGTCAAGGTTTTCACGAAGATCTGCATGC 4895324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290729294240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |