Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq7 161 2e-35
seq3 113 7e-21
>seq7
Length=2048283
Score = 161 bits (178), Expect = 2e-35
Identities = 162/208 (78%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| || |||| |||||| || ||||||||||| ||||||||||| || ||
Sbjct 116415 GCTAAGCGTCACCGAAAGAT-TCTTCGCGACAACATCCAAGGTATCACCAAGCCTGCCAT 116473
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| || |||||||| || ||||||||| |||| | || | || |||||||
Sbjct 116474 CCGACGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTCGGCCATGATATACGAAGAGAC 116533
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| |||| | ||| ||||||| || |||| || | ||| ||| | ||| |||||
Sbjct 116534 CCGTGGTGTTCTCAAGTCCTTCCTCGAGTCCGTCATTCGTGACGCTGTTACCTACACCGA 116593
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCC 16639
||||| || | ||||||||||| |||
Sbjct 116594 ACACGCGAAGAGAAAGACTGTCACTTCC 116621
>seq3
Length=8560927
Score = 113 bits (124), Expect = 7e-21
Identities = 115/149 (77%), Gaps = 1/149 (1%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||| ||| || || ||||| || || ||||||||||| ||||| || ||||| || |||
Sbjct 4067973 AGAT-TCTCCGTGACAACATTCAGGGTATCACCAAGCCCGCTATTCGACGTCTCGCCCGT 4067915
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
|||||||| ||||||||| | |||| || |||| ||||||| |||| ||| | |||
Sbjct 4067914 CGTGGTGGTGTCAAGCGTATTTCTGCTATGATCTACGAAGAGACCCGTGGTGTCCTCAAG 4067855
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGC 16596
| |||||| | ||| |||| ||||||
Sbjct 4067854 ACCTTCCTGGAAGGCGTCATCCGTGATGC 4067826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075123198212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |