Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq7 161 2e-35 seq3 113 7e-21 >seq7 Length=2048283 Score = 161 bits (178), Expect = 2e-35 Identities = 162/208 (78%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| || |||| |||||| || ||||||||||| ||||||||||| || || Sbjct 116415 GCTAAGCGTCACCGAAAGAT-TCTTCGCGACAACATCCAAGGTATCACCAAGCCTGCCAT 116473 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| || |||||||| || ||||||||| |||| | || | || ||||||| Sbjct 116474 CCGACGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTCGGCCATGATATACGAAGAGAC 116533 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| |||| | ||| ||||||| || |||| || | ||| ||| | ||| ||||| Sbjct 116534 CCGTGGTGTTCTCAAGTCCTTCCTCGAGTCCGTCATTCGTGACGCTGTTACCTACACCGA 116593 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCC 16639 ||||| || | ||||||||||| ||| Sbjct 116594 ACACGCGAAGAGAAAGACTGTCACTTCC 116621 >seq3 Length=8560927 Score = 113 bits (124), Expect = 7e-21 Identities = 115/149 (77%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| ||| || || ||||| || || ||||||||||| ||||| || ||||| || ||| Sbjct 4067973 AGAT-TCTCCGTGACAACATTCAGGGTATCACCAAGCCCGCTATTCGACGTCTCGCCCGT 4067915 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 |||||||| ||||||||| | |||| || |||| ||||||| |||| ||| | ||| Sbjct 4067914 CGTGGTGGTGTCAAGCGTATTTCTGCTATGATCTACGAAGAGACCCGTGGTGTCCTCAAG 4067855 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGC 16596 | |||||| | ||| |||| |||||| Sbjct 4067854 ACCTTCCTGGAAGGCGTCATCCGTGATGC 4067826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075123198212