Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 2e-18
>seq3
Length=8560927
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| || ||||| || | ||||| | || | || || | |
Sbjct 4895550 ATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 4895491
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| ||||| |||||||| || || |||||||| ||
Sbjct 4895490 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCTCCCGACCAG 4895431
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | ||||||| || ||||||||| ||||| |||| | | | |||||||| |||
Sbjct 4895430 CAGCGCCTCATTTTCGCCGGCAAACAGCTCGAGGATGGCCGGACGCTGAGCGACTACAAC 4895371
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| || || || || || | || ||||||||
Sbjct 4895370 ATCCAGAAGGAGTCGACGCTGCACCTGGTCCT 4895339
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| || || || || ||||||| ||||| | || || |
Sbjct 4895322 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAGACGATCACGCTCGAAGTTGAGTCGTCC 4895263
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| ||||| | ||||| ||||| ||||| ||||| || || || || |||
Sbjct 4895262 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATCCCGCCGGACCAA 4895203
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | || || | | ||||| ||| | || |||| ||| || ||||||||||
Sbjct 4895202 CAGCGCCTGATCTTTGCGGGCAAGCAATTGGAGGATGGCCGAACTCTCTCCGACTATAAC 4895143
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGA 26984
|| || || ||||| || |||| ||||| || |||
Sbjct 4895142 ATCCAGAAGGAATCGACGCTCCACCTGGTGCTCAGA 4895107
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 119759 CAGTCGATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACAT 119818
||| || || || |||||||||||||||| |||||| | |||||||||||||||||
Sbjct 3180987 CAGGCGGTCGGCGACAAACTCGATGTATTGACACATGAGCTTCGAATTCATGCCCAACAA 3180928
Query 119819 AGCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869
| ||| || | |||| ||| | || || |||||||| | ||| |||||
Sbjct 3180927 TGAGACGGGGAGGGCATCGGTGAGAAACTCTTTTTCAATCTTGACAGCTTC 3180877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478661897404480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |