Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq4 134 1e-26 seq3 129 6e-25 seq7 111 1e-19 seq9 86.0 6e-12 >seq4 Length=4919768 Score = 134 bits (148), Expect = 1e-26 Identities = 918/1459 (63%), Gaps = 31/1459 (2%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || ||||| || || || ||||| | ||||| || | || | || |||||| | ||| Sbjct 3841282 TTAACGACTTGGAATTCTCCGGCAAGGACACGGCGAGAGTAGATATTTGACGTGTATGGT 3841341 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || ||| | ||||| ||||| || || |||| ||||| || || ||||| || || Sbjct 3841342 TCGAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCATAGGGGCGACA 3841401 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | ||| || || || || | || | | |||||||||| Sbjct 3841402 AGCAGAGAGTTGCGAACGCCATGTTTGGCAATCTCGGCTTTCAAGGAGTCCCAATCCCAC 3841461 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | || | |||| |||||||||||| || | |||||||| | |||||||| Sbjct 3841462 AGGTCCGAGGGAGTGACGTTCCACATGTCGTATTGAAGAATGCCCTGTGAGACGGGGCTG 3841521 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357 || | | | || | ||| |||||||| |||||| || ||||| Sbjct 3841522 CCCTCGTATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGAGGCAGTGAGAGCA 3841581 Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417 | ||||| || || ||||| | || || || | || || || | Sbjct 3841582 GCATGGTAAATGGTTTCAAAGATTTGAATATTCAGTTGCCTGGCCTCGGGAGAGTCAAAG 3841641 Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477 || | ||||| | || ||||||||||| || || | |||| |||| |||||| Sbjct 3841642 GGAAGACGCAGAGCAAGGAAGGCATCGGCGAGACCTTGAACGCCCAGACCGACAGGCCGA 3841701 Query 145478 TGTTTCATGTTGCTCATCCTCGC--CG---ACTCGATAGGATATCGATTACGGTCGATAA 145532 ||| | ||||||| || | || || || ||||| | | ||| ||||| | Sbjct 3841702 TGTCGGAAGTTGCTCTTCTTTGCTTCGGGAACGGGATAGTAGTT-GATA----TCGATGA 3841756 Query 145533 TTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACC 145592 | || || | ||| || || || | || | | | | |||||||| | Sbjct 3841757 TCTTGTTTAGGTTGCGAGTGACCACTTGAGTTACCTCATGAAGACGACCAAAGTCATATT 3841816 Query 145593 GAGCCTCGTCAACGA-CCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651 | ||||| || |||| || || || |||| || |||| ||| || || || Sbjct 3841817 CA-CCTCGAGCCTGATCCACGAAGGTAGGGAGAGCGAGGGAGGCCAGATTGCACACAGCG 3841875 Query 145652 GTCTCCTCGGCGTCGCTGTA--TTGTACGATCTCGGCGCACAAATTGCTACATTTGATGG 145709 ||| || | |||||| || || ||||||| ||| | || | | ||||| Sbjct 3841876 ACCTCGTCAGGA--GCTGTAAATTCGACAATCTCGGTGCAGAGGTTTGAGCTTCGGATGG 3841933 Query 145710 TTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTC 145769 | |||| || | ||| || || || || ||||| ||||||||||| |||||||| || Sbjct 3841934 TACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATGTAGGGGG 3841993 Query 145770 CGCCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCAAGTCCTGCGCACGCACCTG 145827 |||||||| ||| | ||| | |||| | || | | | ||| || ||| Sbjct 3841994 TCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCAT--AGCTTCTGGGCCTTAACCGT 3842051 Query 145828 CTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTA 145887 ||| | || ||||| | |||||| || ||| || |||| || || || || Sbjct 3842052 CTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACAGTTCCTTGAAGTCGTCGCCATA 3842111 Query 145888 GCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTT 145947 | || | || || || || | || || | || | ||| | ||| | Sbjct 3842112 GACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGAGTGTCCACTCTTGGTTCTTCTC 3842171 Query 145948 GACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCA 146007 ||| || ||||| ||||| || || |||||| || || | ||||||||| ||| || Sbjct 3842172 GACACGTTCCATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGCGTGCTCTGAC 3842231 Query 146008 ATCCTCAGCACCCATGTTTCGCTT-CAAATT-AAGCACACTATAGATGTCCGCGTGCCAC 146065 || || || || ||| | || || ||| | | | | | ||| |||||||| Sbjct 3842232 CTCTTCCTTGCCG-TGGTTCTTTCGCAGGTTCAAGAAGTCGAAA-ACGTCTGCGTGCCAT 3842289 Query 146066 GGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGTGACGT 146122 ||||| | |||| ||| | ||| ||| || ||| || |||||||| |||| || Sbjct 3842290 GGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACGTAGCGA 3842349 Query 146123 ACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAG 146182 | | ||||| |||||||| | |||||| || || ||| ||| || || Sbjct 3842350 GCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTGGTCCCT 3842409 Query 146183 TTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGCCGTAC 146242 || || || || || | |||||| |||| | ||| | ||| ||| | | Sbjct 3842410 GCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTGAGGCCAATACCTCCGGCAGTC 3842469 Query 146243 TTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCGCTTCG 146301 ||||| || ||| || ||| ||| || || |||||||| || ||||| || | Sbjct 3842470 TTGGAAATCATGGCACAAGTCTT-GAGAGTGTCATAGATGCCCTCGATGCTGTCTTCTTT 3842528 Query 146302 AATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGT 146361 ||| | | || ||||| ||| ||| ||| | || || || || ||||| ||| Sbjct 3842529 CATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGAACAGCGT 3842588 Query 146362 CGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCATCCGATACGTTTCGATAGCGTCTT 146420 || ||||| || || || || | || ||| | || || || ||||| | || Sbjct 3842589 GGGTGAAGCGTGGGTGAAGCACTTCTGGGA-CATGAGGTTGTAGGTCTCAATAGCCTTTT 3842647 Query 146421 GAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCCG 146480 || ||||||||||||||| || | || || |||||||||||||||||||| || || | Sbjct 3842648 CAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTGGGGACGTTCTG 3842707 Query 146481 CCACTTGATTGTCAATCTT 146499 | ||||| || ||||||| Sbjct 3842708 CGACTTGCTTCCCAATCTT 3842726 >seq3 Length=8560927 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||| || || | || | ||||||||||| || |||||||| ||||| Sbjct 4895323 GCCACCGCGGAGACGGAGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 4895382 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || ||||| ||||| ||||| ||| | || | ||||||||||| ||||| Sbjct 4895383 CAGCGTCCGGCCATCCTCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGG 4895442 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || |||||||| ||| || ||||| | || | || ||| ||||||||| Sbjct 4895443 AATGCCCTCTTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGAC 4895502 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || | ||||| ||||| ||||||||| Sbjct 4895503 CTCAAGAGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCATG 4895551 Score = 122 bits (134), Expect = 8e-23 Identities = 275/405 (68%), Gaps = 9/405 (2%) Strand=Plus/Plus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCG-C 46142 || || ||| | ||||||||| | |||||||| || |||||| ||| | | | Sbjct 3180592 ATCCCATGCATTCGCAAGAAAGCAGACTGGGCTTTGCGATGGATCG-CAGATAAAGAGTC 3180650 Query 46143 GACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAG 46202 || || ||| |||| | || || ||||| || || ||| |||| || ||||| Sbjct 3180651 GAGCTTTGCCCAGCGGTTAGTTGCTTTTGCAGCCGTCGAAGGCATCTTCTTCTCTGGATC 3180710 Query 46203 TTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262 ||||| || ||||| | |||| | ||||||| | ||||||||||| || || ||| Sbjct 3180711 CTTTGCAGCGATCTTCTGGCTCAAGAGCAAGGGCCTGATGCCCGGCCTCACTTTCTCCAA 3180770 Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTC-TACTATAACA 46321 |||||| || || || || ||||| |||||||||||||||| || ||| | | |||| Sbjct 3180771 CGAGCTTATCTCCCGTGATGAGGGTATGCATACGGACTTTGCATGCCTCTTGATGCAACA 3180830 Query 46322 CTCGCGTGCACGACAAGCTTGCGCCCGACAC-CGTGCTGAGCATGTTCAAGGAGGCGGTG 46380 || | || |||| | | ||| | || | | | ||| ||| || || || Sbjct 3180831 -TCTCAAGC---ACAAACCCG-ACCCAAAACTCATCGAAAACATTATCACCGAAGCTGTC 3180885 Query 46381 GCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCA 46440 ||||| || |||||| | || | || || |||| | || |||||||||| | Sbjct 3180886 AAGATTGAAAAAGAGTTTCTCACCGATGCCCTCCCCGTCTCATTGTTGGGCATGAATTCG 3180945 Query 46441 CAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTC 46485 || ||||| | |||||||||||||| || ||||| |||||| Sbjct 3180946 AAGCTCATGTGTCAATACATCGAGTTTGTCGCCGACCGCCTGCTC 3180990 >seq7 Length=2048283 Score = 111 bits (122), Expect = 1e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| || || ||| || ||||||||||| ||| ||| Sbjct 22036 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGA 21977 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||||||||| || ||||| ||||| ||||| ||| || ||||| | | Sbjct 21976 TCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGT 21917 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| ||||||| |||| ||| | ||| || || || || || || |||| Sbjct 21916 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 21857 Query 131225 A 131225 | Sbjct 21856 A 21856 >seq9 Length=3042725 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | |||| || | || | || || ||||| || || ||||| ||| Sbjct 1318702 GCCACCGCGAAGGCGCAAGACCAGGTGGAGAGTGGATTCCTTCTGGATATTGTAGTCGGA 1318761 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||| || || |||||||| ||| |||| | ||||||||||||||||| Sbjct 1318762 GAGGGTGCGACCGTCTTCAAGTTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGAGG 1318821 Query 131127 GATTCCTTCTTTGTC 131141 || ||||| ||||| Sbjct 1318822 AATGCCTTCCTTGTC 1318836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012304386560