Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq12 140 2e-28
seq3 132 3e-26
>seq12
Length=476517
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 390390 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 390449
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 390450 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 390484
>seq3
Length=8560927
Score = 132 bits (146), Expect = 3e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|| || | ||| ||||| ||||| || |||||||||||||| || || ||||| ||||||
Sbjct 4894868 CCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGAC 4894927
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| || |||| || || || || |||||||| || ||||| ||||| || | ||
Sbjct 4894928 AGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGGA 4894987
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| |||||| |||||| ||| || ||| || || | || || || || || ||
Sbjct 4894988 ATGCCTTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCACC 4895047
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|| | ||||| || || |||||||| |||||||| || |||||||||
Sbjct 4895048 TCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCATG 4895095
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
||||| || || || || || || | | || | || || ||||| || || |||||
Sbjct 4895132 TCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTCCAATTGCTTGCCCGCAAAG 4895191
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
|| ||||| ||||| || | |||| |||||| |||||| || || ||| || ||
Sbjct 4895192 ATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGCTCTTGACGTTG 4895251
Query 38247 TGGACAGTATCT--CCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCA 38304
| || || || | ||| ||||||| | || || || || ||||||||||||||||
Sbjct 4895252 TCGATCGTGTCGGACGACT--CAACTTCGAGCGTGATCGTCTTCCCCGTCAAGGTTTTCA 4895309
Query 38305 CGAATATCTGCATG 38318
|||| |||||||||
Sbjct 4895310 CGAAGATCTGCATG 4895323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946857097804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |