Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4 165 1e-35 >seq4 Length=4919768 Score = 165 bits (182), Expect = 1e-35 Identities = 359/533 (67%), Gaps = 6/533 (1%) Strand=Plus/Plus Query 63182 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63241 ||||| ||||| | ||| ||||| | | || || || ||||| || ||||| || | | Sbjct 3842284 TGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACG 3842343 Query 63242 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 63301 || | ||| || || || | || | | ||| || || | ||||||||| || |||||| Sbjct 3842344 TAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTG 3842403 Query 63302 GTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCC 63359 ||||||| |||||| ||| |||||||||| | | |||| || || || || | Sbjct 3842404 GTCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTG--AGGCCAATACCTC 3842461 Query 63360 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 63419 | || | || || || | || || || | || |||||||||||||| || || | Sbjct 3842462 CGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATGCTGT 3842521 Query 63420 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 63479 | || |||||| | | || ||| |||| || | || ||||| ||||| | Sbjct 3842522 CTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGA 3842581 Query 63480 ATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63539 | | || || |||||||| || || || || | || | || ||||| |||||||||| Sbjct 3842582 ACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCAATAG 3842641 Query 63540 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63599 | || | || |||||| || ||||| |||||||| | |||||| || || | Sbjct 3842642 CCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTGGGGAC 3842701 Query 63600 TTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 63658 ||| ||| |||| || || || | | ||| ||| | ||||| || || || ||| Sbjct 3842702 GTTCTGCGA-CTTGCTTCCCAATCTTGAGGAGGTATGATCTCTCCAACGTCTTGAAGCCA 3842760 Query 63659 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 63711 ||||| | || |||||||| ||||| | ||| | || |||| || ||| Sbjct 3842761 AAATATTGATAGTTGAAGTCTCGGTCGTAGACAATTGCAGAATTGAATTCATC 3842813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631334686400