Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq4 165 1e-35
>seq4
Length=4919768
Score = 165 bits (182), Expect = 1e-35
Identities = 359/533 (67%), Gaps = 6/533 (1%)
Strand=Plus/Plus
Query 63182 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 63241
||||| ||||| | ||| ||||| | | || || || ||||| || ||||| || | |
Sbjct 3842284 TGCCATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACG 3842343
Query 63242 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 63301
|| | ||| || || || | || | | ||| || || | ||||||||| || ||||||
Sbjct 3842344 TAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTG 3842403
Query 63302 GTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCC 63359
||||||| |||||| ||| |||||||||| | | |||| || || || || |
Sbjct 3842404 GTCCCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTG--AGGCCAATACCTC 3842461
Query 63360 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 63419
| || | || || || | || || || | || |||||||||||||| || || |
Sbjct 3842462 CGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATGCTGT 3842521
Query 63420 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 63479
| || |||||| | | || ||| |||| || | || ||||| ||||| |
Sbjct 3842522 CTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGA 3842581
Query 63480 ATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAG 63539
| | || || |||||||| || || || || | || | || ||||| ||||||||||
Sbjct 3842582 ACAGCGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCAATAG 3842641
Query 63540 CTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTC 63599
| || | || |||||| || ||||| |||||||| | |||||| || || |
Sbjct 3842642 CCTTTTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTGGGGAC 3842701
Query 63600 TTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 63658
||| ||| |||| || || || | | ||| ||| | ||||| || || || |||
Sbjct 3842702 GTTCTGCGA-CTTGCTTCCCAATCTTGAGGAGGTATGATCTCTCCAACGTCTTGAAGCCA 3842760
Query 63659 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 63711
||||| | || |||||||| ||||| | ||| | || |||| || |||
Sbjct 3842761 AAATATTGATAGTTGAAGTCTCGGTCGTAGACAATTGCAGAATTGAATTCATC 3842813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631334686400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |