Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 4e-20
>seq3
Length=8560927
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || ||||| || || | ||||| ||||||| ||||||||
Sbjct 4895322 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAGACGATCACGCTCGAAGTTGAGTCGTCC 4895263
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| || ||| ||||| ||||| || || || ||||||
Sbjct 4895262 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAAGGCATCCCGCCGGACCAA 4895203
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| ||||| ||||| || |||| || ||| | ||| || ||
Sbjct 4895202 CAGCGCCTGATCTTTGCGGGCAAGCAATTGGAGGATGGCCGAACTCTCTCCGACTATAAC 4895143
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213
|| || || ||||| ||||| || | ||||| ||
Sbjct 4895142 ATCCAGAAGGAATCGACGCTCCACCTGGTGCTCAG 4895108
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|| ||||| || || || || || ||||| || || ||||||| | || || |||||
Sbjct 4895553 ACCATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCC 4895494
Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| ||||| | ||| || ||| |||||||| || ||||| || |||
Sbjct 4895493 AGCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCTCCCGAC 4895434
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||||| | ||||| ||||||||||| | || |||| || || || |||| |||
Sbjct 4895433 CAGCAGCGCCTCATTTTCGCCGGCAAACAGCTCGAGGATGGCCGGACGCTGAGCGACTAC 4895374
Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201
|| || || || || || ||||| ||
Sbjct 4895373 AACATCCAGAAGGAGTCGACGCTGCA 4895348
Score = 89.7 bits (98), Expect = 4e-13
Identities = 150/213 (70%), Gaps = 8/213 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| || |||||||| || || | || || | || |||||| ||
Sbjct 4895094 ATGCAGATCTTTGTGAAAACTTTGACGGGAAAGACGATTACGCTGGAGGTGGAGAGCTCG 4895035
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| ||||| |||| ||||| | ||| ||||| ||||| ||||| || ||
Sbjct 4895034 GACACGATCGACAACGTCAAG--AGCAAGAT-TCAG-GACAAGGAAGGCATTCCGCCGGA 4894979
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||||||| | || ||||||||||| || || ||||| | || || || || ||
Sbjct 4894978 CCAACAGCGCCTGATCTTTGCCGGCAAGCAGTTGGAAGACGGCCGGACGCTGTCTGACTA 4894919
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207
||| || || || || ||| ||||| || ||
Sbjct 4894918 CAACATCCAGAAGGAGAGCACTCTACACTTGGT 4894886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327556380460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |