Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 4e-15 >seq3 Length=8560927 Score = 96.9 bits (106), Expect = 4e-15 Identities = 173/250 (69%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| |||||||| ||||| | ||| || || || || || | ||| ||| ||| || | Sbjct 3180816 GCATGCAAAGTCCGTATGCATACCCTCATCACGGGAGATAAGCTCGTTGGAGAAAGTGAG 3180757 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | ||| || |||||||||| || || | ||||| ||||| || || Sbjct 3180756 GCCGGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATCGCTGCAAAGGATCCAGAGAAGAA 3180697 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGC 93269 || ||||| ||||||||||| || || | || | |||||| | | ||| |||| Sbjct 3180696 GATGCCTTCGACGGCTGCAAAAGCAACTAACCGCTGGGCAAAGCTCGACTCTTTATCTGC 3180637 Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 ||||||| |||||||| || ||||| || ||| || || | ||| || || |||| Sbjct 3180636 -GATCCATCGCAAAGCCCAGTCTGCTTTCTTGCGAATGCATGGGATTGTGTCAATGGCGT 3180578 Query 93330 TAAATAGGTA 93339 ||| || || Sbjct 3180577 CAAAGAGATA 3180568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860215296160