Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 4e-15
>seq3
Length=8560927
Score = 96.9 bits (106), Expect = 4e-15
Identities = 173/250 (69%), Gaps = 2/250 (1%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| |||||||| ||||| | ||| || || || || || | ||| ||| ||| || |
Sbjct 3180816 GCATGCAAAGTCCGTATGCATACCCTCATCACGGGAGATAAGCTCGTTGGAGAAAGTGAG 3180757
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
|| || | ||| || |||||||||| || || | ||||| ||||| || ||
Sbjct 3180756 GCCGGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATCGCTGCAAAGGATCCAGAGAAGAA 3180697
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CTGC 93269
|| ||||| ||||||||||| || || | || | |||||| | | ||| ||||
Sbjct 3180696 GATGCCTTCGACGGCTGCAAAAGCAACTAACCGCTGGGCAAAGCTCGACTCTTTATCTGC 3180637
Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329
||||||| |||||||| || ||||| || ||| || || | ||| || || ||||
Sbjct 3180636 -GATCCATCGCAAAGCCCAGTCTGCTTTCTTGCGAATGCATGGGATTGTGTCAATGGCGT 3180578
Query 93330 TAAATAGGTA 93339
||| || ||
Sbjct 3180577 CAAAGAGATA 3180568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860215296160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |