Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq3 122 7e-23
>seq3
Length=8560927
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| |||||||| || || || ||| | || || || ||||| | | |
Sbjct 4895094 ATGCAGATCTTTGTGAAAACTTTGACGGGAAAGACGATTACGCTGGAGGTGGAGAGCTCG 4895035
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || ||||| |||||||| || ||||| || || |||
Sbjct 4895034 GACACGATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAAGGCATTCCGCCGGACCAA 4894975
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || ||||||||||| ||||| || || ||| || | || || ||||||
Sbjct 4894974 CAGCGCCTGATCTTTGCCGGCAAGCAGTTGGAAGACGGCCGGACGCTGTCTGACTACAAC 4894915
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || ||| |||| || || ||||| ||||| || ||
Sbjct 4894914 ATCCAGAAGGAGAGCACTCTACACTTGGTCTTGCGGTTGCGTGGCGG 4894868
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || ||||| || || || || || |||||||||| || || ||| |
Sbjct 4895550 ATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 4895491
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || || || ||||| ||||| ||||| ||||| ||
Sbjct 4895490 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGCATTCCTCCCGACCAG 4895431
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || |||||||||||| | |||||| ||| || | ||| ||||||
Sbjct 4895430 CAGCGCCTCATTTTCGCCGGCAAACAGCTCGAGGATGGCCGGACGCTGAGCGACTACAAC 4895371
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || || ||
Sbjct 4895370 ATCCAGAAGGAGTCGAC 4895354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727570303460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |