Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4 244 2e-59 seq3 159 7e-34 >seq4 Length=4919768 Score = 244 bits (270), Expect = 2e-59 Identities = 1024/1588 (64%), Gaps = 75/1588 (5%) Strand=Plus/Plus Query 243877 GTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG-GT 243935 |||||| |||||| ||| |||| ||||| | || || || ||||| | || || Sbjct 3841068 GTTGAGAGACTGGGACTGATCGATGAAGGCACCGCGGTCCGCTGCCATTTGCAGGACTGT 3841127 Query 243936 CCTTCTGA-GATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCT 243994 || | | ||| || || ||| ||||| |||| | |||| || |||||| Sbjct 3841128 CCGTTGGCTGATTTCCCACACG--GTCTTATAGAGAGCTTTGATGTCTGCGGGGATGTTG 3841185 Query 243995 TCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCAC 244054 ||||||||| | |||||| | | | |||| | | ||| |||||| |||| Sbjct 3841186 GGGATGTTCTGGATCGAGCCGCCTTCGGCTATGATTCGATTCTTCATATTATCGGACCAC 3841245 Query 244055 AGGCCCAAGCGCTCCAGCGCCT----CGACCAGGTGCCTGTTCACCACCTGAAACTCTCC 244110 ||||||||| | || ||| | |||| | | || || || || || ||||| Sbjct 3841246 AGGCCCAAGTCAACTAGATCCTTCAGCAACCATGGG----TTAACGACTTGGAATTCTCC 3841301 Query 244111 CGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170 | || || ||||| ||||| || || || |||| | || ||||||| Sbjct 3841302 GGCAAGGACACGGCGAGAGTAGATATTTGACGTGTATGGTTCGAAACATTCGTTGTTGCC 3841361 Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCAT--GGGCGACACCAGCAGACTGTTCCTCACG 244228 || ||||| | || ||||| ||||| |||||||| |||||| ||| | ||| Sbjct 3841362 TAGAATCTGAGAGGTCGAGGCAGTAGGCATAGGGGCGACA--AGCAGAGAGTTGCGAACG 3841419 Query 244229 CCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAG---TCCCACATGCCCGAGAGGTCC 244285 || || | ||| | ||| ||| ||| || ||||| || || | |||||| Sbjct 3841420 CCATG--TTTGGC-----AATCTCGGCT--TTCAAGGAGTCCCA-ATCCC--ACAGGTCC 3841467 Query 244286 TCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCG 244345 | | ||| | ||||||||| | || || | |||| |||||||||||||||| Sbjct 3841468 GAGGGAGTGACGTTCCACATGTCGTATTGAAGAATGCCCTGTGAGACGGGGCTGCCCTCG 3841527 Query 244346 TAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAG 244405 || || |||| || | || ||| || | || | ||| || || | | Sbjct 3841528 TATGTTTCATAGGTTCCCTGCTCCTTGGCGAGTTCGCAAGAGGCAGTGAGAGCAGCATGG 3841587 Query 244406 TAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGG--GA 244463 || ||||| || ||||| | |||| | | ||||| | || ||||| || Sbjct 3841588 TAAATGGTTTCAAAGATTTGAATATTCAGTTGCCTGGCCTCGGGAGAGTCAAAGGGAAGA 3841647 Query 244464 TGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTC 244523 || | || | |||| | ||||| || || || ||||| | |||| || | |||| Sbjct 3841648 CGCAGAGCA--AGGAAGGCATCGGCGAGACCTTGAACGCCCAGACCGACAGGCCGATGTC 3841705 Query 244524 GCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGA 244583 | |||| | | |||||||| ||||| || ||||| ||||| | |||||| | Sbjct 3841706 GGAAGTTGCTCTTCTTTGCTTCGGGAACGGGATAGTAGTTGATATCGATGATCTTGTTTA 3841765 Query 244584 GGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGAT 244643 ||||||| |||| || | || || || | |||||| || || Sbjct 3841766 GGTTGCGAGTGACCACTTGAGTTACCTCATGAAGACGACCAAAGTCATATTCA------- 3841818 Query 244644 CCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGG 244703 ||||| | |||||| | || | | ||| |||| | |||||| ||||| || | Sbjct 3841819 CCTCG---AGCCTGATCCACG-AAGGTAGG-GAGAGCGAGGGAGGCCAGATTGCACACAG 3841873 Query 244704 CCACCTCCTCCG-AGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTT--GA 244760 | ||||| || | || || | | | ||||||||||||||||||||| || ||| || Sbjct 3841874 CGACCTCGTCAGGAGCTG-TAAATTCGACAATCTCGGTGCAGAGGTT--TGAGCTTCGGA 3841930 Query 244761 TGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGG 244820 |||| |||| || || || ||| ||| ||||||||||||||||| |||||| ||| Sbjct 3841931 TGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATGTAGG 3841990 Query 244821 GCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCG 244880 | ||| |||||| ||| || |||||| | ||| || | | ||||| |||| Sbjct 3841991 GGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCATAGCTTCTGGGCCTTAACCG 3842050 Query 244881 TCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCC 244940 || |||| | ||||| |||||| | |||||| ||| ||| ||| ||| Sbjct 3842051 TCTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACAGTTCCTTGAAGTCGTCGCCAT 3842110 Query 244941 AGACCTCGTCTAGGCC-GGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCC 244999 |||| || |||| || ||||| | | ||||| | ||| ||||||| | | | Sbjct 3842111 AGACGTCAGCTAGACCAGGGGCCTCATG-AGGGCAGAAGAGTGTCCACTCTTGGTTCTTC 3842169 Query 245000 TTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTC 245059 | ||| | | |||||| | ||| || |||| ||||| | ||| | ||| | || ||| Sbjct 3842170 TCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGC--GTGCTC 3842227 Query 245060 TG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCC 245117 || ||| ||| ||| |||||| | ||| | ||| ||||| || ||||| |||||| Sbjct 3842228 TGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACGTCTGCGTGCC 3842287 Query 245118 AGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCC 245177 | || || | ||||| || | ||| || || |||||||| || |||||||| | | Sbjct 3842288 ATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGA----CG 3842343 Query 245178 TCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTG 245233 | ||||| |||||||| ||| || | || | | || || ||| ||| ||| Sbjct 3842344 TAGCGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTG 3842403 Query 245234 GTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCC 245289 || || || |||| || || | | | ||| |||| ||| ||| | || Sbjct 3842404 GTCCCTGCAATATAGGATCCTGTGGCAC---GAATGC-AATGGGCATTGAGGCCAATACC 3842459 Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349 ||||| |||||| || | ||| || |||||| ||||| |||||||| ||||| Sbjct 3842460 TCCGGCAGTCTTGGAAATCATGGCACAAGTCTTGAGAGTGTCATAGATGCCCTCGATGCT 3842519 Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409 ||| ||||||| | || ||||||||||||||||| || | || | | | || Sbjct 3842520 GTCTTCTTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATT 3842579 Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 |||||| ||||| |||||||| ||| Sbjct 3842580 GAACAGCGTGGGTGAAGCGTGGGTGAAG 3842607 >seq3 Length=8560927 Score = 159 bits (176), Expect = 7e-34 Identities = 284/409 (69%), Gaps = 9/409 (2%) Strand=Plus/Plus Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCG-A 42676 ||||| || || || || ||||| ||||| || |||||||| | ||||||| | Sbjct 3180580 GCCATTGACACAATCCCATGCATTCGCAAGAAAGCAGACTGGGCTTTGCGATGGATCGCA 3180639 Query 42677 GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTT 42736 || | || | | || | | || || | || || ||| | |||||||| |||||||| Sbjct 3180640 GA-TAAAGAGTCGAGCTTTGCCCAGCGGTTAGTTGCTTTTGCAGCCGTCGAAGGCATCTT 3180698 Query 42737 CTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACT 42796 |||||| || |||| || | ||||||||||||||| |||| ||||||||| || Sbjct 3180699 CTTCTCTGGATCCTTTGCAGCGATCTTCTGGCTCAAGAGCAAGGGCCTGATGCCCGGCCT 3180758 Query 42797 CACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCT 42856 ||| ||||| ||||| || ||| | | || ||||| |||||| ||||||||| ||||| Sbjct 3180759 CACTTTCTCCAACGAGCTTATCTCCCGTGATGAGGGTATGCATACGGACTTTGCATGCCT 3180818 Query 42857 CCTGTTCTCGAGCCACCTCAGGCACAAGCCC--TCGAAGGAGCGGGTCCGGGCCATCATC 42914 | || | | || |||| |||||| ||| | || | | || ||| ||| Sbjct 3180819 CTTGAT---GCAACATCTCAAGCACAAACCCGACCCAA--AACTCATCGAAAACATTATC 3180873 Query 42915 ACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTC 42974 || || || || |||| || || ||||| ||||| | | || ||||| || || | Sbjct 3180874 ACCGAAGCTGTCAAGATTGAAAAAGAGTTTCTCACCGATGCCCTCCCCGTCTCATTGTTG 3180933 Query 42975 GGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023 |||||||| | |||||||| | |||||| ||| |||||||||| Sbjct 3180934 GGCATGAATTCGAAGCTCATGTGTCAATACATCGAGTTTGTCGCCGACC 3180982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338208443840