Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 4e-12 seq2 86.0 1e-11 >seq7 Length=2048283 Score = 87.8 bits (96), Expect = 4e-12 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 332811 ATGATCACGACACCTCCACCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGACTCTCA 332870 ||||||||||| || || |||| | ||| || || | | | || || || ||| Sbjct 854562 ATGATCACGACGCCACCTTCAAACTCCTTCAGAGCCTTCGAGAGAGCACCCAGCGAATCA 854621 Query 332871 CGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGTTGTTGCCATAGAGC- 332929 ||||| | | ||||||| ||||| |||||||| |||| || || |||||||| | || Sbjct 854622 CGGTCGAGGTAGTTGGTAGGTTCATCCAAAACAATCAAATGAGGGCGTTGCCAT-GTGCA 854680 Query 332930 AGCGCCGATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGAATGAGT 332989 |||| | | ||| | || | || || |||||||||||||| ||||| || |||| Sbjct 854681 AGCGGCAAGAACGACCTTAACACGCTGACCACCAGATAGACCACGCATGCGGGAGTGAGA 854740 Query 332990 TGTAAATTCAGGGTCGAGACCAACATTTGCCATATGTTCTTC 333031 | | |||| |||||||| | || || |||| |||| Sbjct 854741 GATCAGCTCAGCATCGAGACCGAAGTTGGCACCATGTGCTTC 854782 >seq2 Length=3618913 Score = 86.0 bits (94), Expect = 1e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 333777 TCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATC 333836 ||||||||| ||| ||||| || ||||||||||| || |||||||| || || ||| Sbjct 3505508 TCGTAATGGTAAATGTCCGTGCATACTGCGTCGAGGAAGCCAGAGTCGTGAGAGACGATC 3505567 Query 333837 ACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACA 333896 | | | | ||| || | || || || || |||||| | ||||| | ||| Sbjct 3505568 AATGAGGTGATTTCCGTATGCTTCTGGAGATACTCTTCGAGCCACTTGACGTTTGCCACG 3505627 Query 333897 GAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGT 333956 |||||||||||||| ||||| || || || | | || || ||||| || | | Sbjct 3505628 TCGAGATGGTTGGTCGGTTCGTCGAGCAGGAGAACATCGGCTCGCATCAGCATAGCCCTT 3505687 Query 333957 GCAAGAGCGAGTTTCATTTTCCACCCTCCTG--AAAGAG 333993 || | ||| || ||||| ||||| ||||| | |||||| Sbjct 3505688 GCCAAAGCCAGCTTCATCTTCCATCCTCCAGACAAAGAG 3505726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878813025400