Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016-
09-07] 84 sequences; 37,087,895 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 4e-21
seq4 95.1 1e-14
seq9 91.5 1e-13
>seq3
Length=8560927
Score = 116 bits (128), Expect = 4e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || || | |||||| || || || |||||||| || | || || | ||
Sbjct 4895339 AGGACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCATCC 4895398
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| ||||| |||||||| ||||||| |||||||||||||||||||| || ||||| ||
Sbjct 4895399 TCGAGCTGTTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCC 4895458
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || | || || || || | ||| | ||||
Sbjct 4895459 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTC 4895518
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| ||||| ||||| ||||| || |||||
Sbjct 4895519 TTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 4895550
Score = 98.7 bits (108), Expect = 1e-15
Identities = 224/332 (67%), Gaps = 15/332 (5%)
Strand=Plus/Minus
Query 132651 AGCAACCGATCCGCCACAAACTCGATATATTCGCACATGGCGCGCGAATTCATACCCAAC 132710
|||| || || || ||||||||||| |||| |||||| ||||||||| ||||||
Sbjct 3180989 AGCAGGCGGTCGGCGACAAACTCGATGTATTGACACATGAGCTTCGAATTCATGCCCAAC 3180930
Query 132711 AAATCGCAAGGAAGCGCGCTAGTGAAAAACTCTTTTTCAATGTTCACTGCTTCCACGAAC 132770
|| | || || || |||| ||||||||||||||| || || ||||| ||
Sbjct 3180929 AATGAGACGGGGAGGGCATCGGTGAGAAACTCTTTTTCAATCTTGACAGCTTCGGTGATA 3180870
Query 132771 ATGTCCAGTATTTCGGCGGATGACATTTTG-TCGCGCTCATCAAT-ATATTCATTGTAAT 132828
|||| ||||| |||| ||| | ||| | | | | | || ||| |
Sbjct 3180869 ATGT------TTTCG----ATGAGTTTTGGGTCGGGTTTGTGCTTGAGATG--TTGCATC 3180822
Query 132829 ACAAA-CACGCAAAGTTTGTATGCAAACCTTCGTCTCTTGATATAAGCTCGTTGCTGAAC 132887
| | || ||||||| ||||||| ||| || || | || |||||||||||| |||
Sbjct 3180821 AAGAGGCATGCAAAGTCCGTATGCATACCCTCATCACGGGAGATAAGCTCGTTGGAGAAA 3180762
Query 132888 GTGAGGCCGGGCATGATGCCTTTTGTTTTAATAAAAAATATTGCCGCAAAACTGCCCGAA 132947
|||||||||||||| | ||| || | || | | || || || ||||| || ||
Sbjct 3180761 GTGAGGCCGGGCATCAGGCCCTTGCTCTTGAGCCAGAAGATCGCTGCAAAGGATCCAGAG 3180702
Query 132948 AAGAACACGCCTTCTACAATTGCAAAAGCCAC 132979
||||| | |||||| || ||||||||| ||
Sbjct 3180701 AAGAAGATGCCTTCGACGGCTGCAAAAGCAAC 3180670
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || || |||||||| || | | || || ||||||| | ||||||||||||| |
Sbjct 4894904 TCCTTCTGGATGTTGTAGTCAGACAGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAG 4894963
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
|| || ||||| ||||| || ||||| ||||| || || || || || ||| ||
Sbjct 4894964 ATCAGGCGCTGTTGGTCCGGCGGAATGCCTTCCTTGTCCTGAATCTTGCTCTTGACGTTG 4895023
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || | ||||| || | || | ||||| || ||||||||||| ||
Sbjct 4895024 TCGATCGTGTCCGAGCTCTCCACCTCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACA 4895083
Query 64433 AAAATTTGCAT 64443
|| || |||||
Sbjct 4895084 AAGATCTGCAT 4895094
>seq4
Length=4919768
Score = 95.1 bits (104), Expect = 1e-14
Identities = 284/431 (66%), Gaps = 18/431 (4%)
Strand=Plus/Plus
Query 153813 GACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCGCCATGTCAATCAAGTTTTTACT- 153871
|||||| |||||||||||| || ||||| || || ||||| | || | | | |
Sbjct 3841075 GACTGGGACTGATCGATGAAGGCACCGCGGTCCGCTGCCATTTG---CAGGACTGTCCGT 3841131
Query 153872 --GCTCATTTCCCACACAGTTTTGTAGACGGCTTTAATGTCGTCGGGTATGCGATCAATT 153929
||| ||||||||||| || || |||| ||||| ||||| |||| ||| ||
Sbjct 3841132 TGGCTGATTTCCCACACGGTCTTATAGAGAGCTTTGATGTCTGCGGGGATGTTGGGGATG 3841191
Query 153930 TTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGCGCATGTGGTCGTCGTACAAATTT 153989
||||| | ||| || | ||||| || ||| ||| | ||| |||
Sbjct 3841192 TTCTGGATCGAGCCGCCTTCGGCTATGATTCGATTCTTCATATTATCGGACCACAGGCCC 3841251
Query 153990 A-GTCGACATAAATCTT----CAACCAAGTGCTGGTTAATTACTTGAAAATCGCCGGCCA 154044
| ||| || || ||| | |||||| | |||||| ||||| || || ||||| |
Sbjct 3841252 AAGTCAAC-TAGATCCTTCAGCAACCATG----GGTTAACGACTTGGAATTCTCCGGCAA 3841306
Query 154045 ATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGATTCGTTGTTGCCTAATA 154104
|| ||||| || | ||| ||| | || ||||| ||||||||||||||| |
Sbjct 3841307 GGACACGGCGAGAGTAGATATTTGACGTGTATGGTTCGAAACATTCGTTGTTGCCTAGAA 3841366
Query 154105 TTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGAGTTTCGCAAACCGTGTT 154164
| |||| || | || || |||||| || || | || |||||| || | || ||||
Sbjct 3841367 TCTGAGAGGTCGAGGCAGTAGGCATAGGGGCGACAAGCAGAGAGTTGCGAACGCCATGTT 3841426
Query 154165 TTGCAATGCGCAATTTTAAATCTG-CCCAATTCCACAAGTTGGTAGGTTGCACGTTCCAC 154223
| ||||| | | ||| || | |||||| ||||| || | || |||||||||
Sbjct 3841427 TGGCAAT-CTCGGCTTTCAAGGAGTCCCAATCCCACAGGTCCGAGGGAGTGACGTTCCAC 3841485
Query 154224 ATGTCGTATTG 154234
|||||||||||
Sbjct 3841486 ATGTCGTATTG 3841496
>seq9
Length=3042725
Score = 91.5 bits (100), Expect = 1e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| || || || ||||| || | || |||||| |||||||||| ||||||||
Sbjct 1318733 GTGGATTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGACCGTCTTCAAGTTGCTTGCCA 1318792
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | || || ||||||||||| |||||||| ||||| || |||
Sbjct 1318793 GCGAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCT 1318837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644275372960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |