Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 306 4e-78 >seq4 Length=4919768 Score = 306 bits (338), Expect = 4e-78 Identities = 1081/1661 (65%), Gaps = 52/1661 (3%) Strand=Plus/Minus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGAT-GGATGGCAGGGTTTC 93782 || |||| |||||| || |||||| || |||||||||||||| || ||| | | | Sbjct 3842765 TATTTTGGCTTCAAGACGTTGGAGAGATCATACCTCCTCAAGATTGGGAAGCAAG-TCGC 3842707 Query 93783 CGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCC 93842 || || || || || |||| ||||| || || | || ||||| ||| ||||| | Sbjct 3842706 AGAACGTCCCCAACACATGCTCATGCGTGTGGCAGTTGGTATTCATGGCGACGACGTTGA 3842647 Query 93843 GAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGAC 93902 || | | | | | | || |||| | ||| | | ||| || | || || Sbjct 3842646 AAAGGCTATTGAGACCTACAACCTCATGTCCCAGAAGTGCTTCACCCACGCTTCACCCAC 3842587 Query 93903 CCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACA 93961 |||||||| || || || || || ||| |||| || || ||| |||| ||| | | Sbjct 3842586 GCTGTTCAATGCCGGAACACCTCAACCTCAGCTGTCCTCCTGCTTCTTGATAGAC-ATGA 3842528 Query 93962 AGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAAT 94021 | | ||| |||| || || | |||| |||||| ||||| | || || || Sbjct 3842527 AAGAAGACAGCATCGAGGGCATCTATGACACTCTCAAGACTTGTGCCATGATTTCCAAGA 3842468 Query 94022 ACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCG 94081 || || || || || ||| || ||| | | ||||||| || ||||| || | Sbjct 3842467 CTGCCGGAGGTATTGGCCTCAATGCCCATTGCATTCGTGCCACAGGATCCTATATTGCAG 3842408 Query 94082 GTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGC 94141 | ||||||||||||||||| || ||| |||| ||||| || ||||||||||| | || | Sbjct 3842407 GGACCAATGGCACCTCCAATGGTCTCATCCCCATGCTTCGCGTCTTCAACAATACTGCTC 3842348 Query 94142 GCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCT 94201 ||||||| |||||||| ||| | | | ||| | || || |||| ||||| || | Sbjct 3842347 GCTACGTCGACCAGGGCGGTAACAAGCGTCCAGGTGCCTTTGCCATCTACCTCGAACCAT 3842288 Query 94202 GGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA 94261 ||||||| ||||| | ||| | |||||||||||||||||||||| || || | Sbjct 3842287 GGCACGCAGACGTTTTCGACTTCTTGAACCTGCGAAAGAACCACGGCAAGGAAGAGGTCA 3842228 Query 94262 GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGA 94321 | || | ||| | ||||| || || ||| || ||| | || ||| |||| ||||||| Sbjct 3842227 GAGCACGCGACTTGTTCTATGCCCTGTGGACTCCTGACTTGTTCATGGAACGTGTCGAGA 3842168 Query 94322 AAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTG 94381 | ||| | |||| || || || || |||| || || || | ||||| | || Sbjct 3842167 AGAACCAAGAGTGGACACTCTTCTGCCCTCATGAGGCCCCTGGTCTAGCTGACGTCTATG 3842108 Query 94382 GATCG-CGTTTTGAA-GACTTGTATGCTCGTTACGAATCGCAGGG-CAAG---GCCAGGA 94435 | || || || || || |||| | | ||||| | |||| | | |||| || Sbjct 3842107 G--CGACGACTTCAAGGAACTGTACGAGAGATACGAGAAGGAGGGACGTGGTCGCCA-GA 3842051 Query 94436 AGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTA 94495 ||||| | || |||||| ||| || ||| | || | |||| ||||| || | Sbjct 3842050 CGGTTA---AGGCCCAGAAGCTATGGTATGCTATCCTCGAGGCACAGACCGAGACTGGGA 3841994 Query 94496 CGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGG 94555 | |||||||| | | ||||||| | ||| ||| ||||||| || || | || Sbjct 3841993 CCCCCTACATGCTTTACAAGGACGCCTGCAATAGAAAGAGCAACCAGAAGAACTTGGGTA 3841934 Query 94556 TGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTG 94615 ||| ||||| || || ||||||||||||||||| | ||| |||| |||||| | | Sbjct 3841933 CCATCCGAAGCTCAAACCTCTGCACCGAGATTGTCGAATTTACAGCTCCTGACGAGGTCG 3841874 Query 94616 CTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGT--C 94673 ||||||| || |||| |||| || || | || |||||| || | || | || Sbjct 3841873 CTGTGTGCAATCTGGCCTCCCTCGCTCTCCCTACCTTCGTG-GATCAGGCTCGAGGTGAA 3841815 Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT--CTTG-AA 94730 || ||| | ||| ||| | ||| | |||| ||| |||| || | || Sbjct 3841814 TATGACTTTGGTCG-TCTTCATGAGGT----AACT------CAAG--TGGTCACTCGCAA 3841768 Query 94731 CCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCT 94790 ||| |||| | | ||||| | |||| ||| ||||| || || || |||| ||| | Sbjct 3841767 CCTAAACAAGATCATCGATATCAACTACTATCCCGTTCCCGAAGCAAAGAAGAGCAACTT 3841708 Query 94791 GAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCG 94850 |||||||| |||| | ||||| || ||| |||| || || | | |||| Sbjct 3841707 CCGACATCGGCCTGTCGGTCTGGGCGTTCAAGGTCTCGCCGATGCCTTCCTTGCTCTGCG 3841648 Query 94851 TCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTA 94910 ||| |||| |||||| ||| || | ||||| | | || || |||| |||||| Sbjct 3841647 TCTTCCCTTTGACTCTCCCGAGGCCAGGCAACTGAATATTCAAATCTTTGAAACCATTTA 3841588 Query 94911 TTACGGGGCCATGAAACAATC-CGTCCACTTGGCCAGATCG-GACG--GCGGGCCAC--A 94964 ||||| | || | || ||| || | ||| | | || || || | Sbjct 3841587 --------CCATGCTGCTCTCACTGCCTCTT-GCGAACTCGCCAAGGAGCAGGGAACCTA 3841537 Query 94965 CGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024 ||| | | | || ||| | |||||||||| |||| | |||| | ||| || Sbjct 3841536 TGAAACATACGAGGGCAGCCCCGTCTCACAGGGCATTCTTCAATACGACATGTGGAACGT 3841477 Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGT 95084 | ||||||| |||| || ||||| | | || || || |||||| || || Sbjct 3841476 CACTCCCTCGGACCTGTGGGATTGGGACTCCTTGAAAGCCGAGATTGCCAAACATGGCGT 3841417 Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144 ||| | |||||||| ||||| ||||| || ||||| || | ||||| || ||||| Sbjct 3841416 TCGCAACTCTCTGCTTGTCGCCCCTATGCCTACTGCCTCGACCTCTCAGATTCTAGGCAA 3841357 Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204 |||||| | |||||||| | ||| || || | ||| | || || || ||||| || Sbjct 3841356 CAACGAATGTTTCGAACCATACACGTCAAATATCTACTCTCGCCGTGTCCTTGCCGGAGA 3841297 Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTG 95263 ||||| ||| | ||| | || ||| || | | || |||| ||||| | Sbjct 3841296 ATTCCAAGTCGTTAACCCATGGTTGCTGAAGGATCTAGTTGACT-TGGGCCTGTGGTCCG 3841238 Query 95264 ACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATAC 95323 | || | ||||| | | | || || |||||| ||||||||||||| | || | Sbjct 3841237 ATAATATGAAGAATCGAATCATAGCCGAAGGCGGCTCGATCCAGAACATCCCCAACATCC 3841178 Query 95324 CGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATC 95364 | | |||||||| || ||||| |||||||||||||| ||| Sbjct 3841177 CCGCAGACATCAAAGCTCTCTATAAGACCGTGTGGGAAATC 3841137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722680540640