Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4 224 1e-53 seq3 114 1e-20 seq7 87.8 2e-12 >seq4 Length=4919768 Score = 224 bits (248), Expect = 1e-53 Identities = 943/1471 (64%), Gaps = 31/1471 (2%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 |||| || ||||| || || || || | || || | | || | ||| ||| | | Sbjct 3841280 GGTTAACGACTTGGAATTCTCCGGCAAGGACACGGCGAGAGTAGATATTTGACGTGTATG 3841339 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 |||| || ||||||| |||||||| || |||| || | || || ||||| || | Sbjct 3841340 GTTCGAAACATTCGTTGTTGCCTAGAATCTGAGAGGTCGAGGCAGTAGGCATAGGGGCGA 3841399 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 | | || ||| || || | ||| || ||| ||| | ||||| | | |||||||| Sbjct 3841400 CAAGCAGAGAGTTGCGAACGCCATGTTTGGCAATCTCGGCTTTCAAGGAGTCCCAATCCC 3841459 Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGAC 153267 |||| |||| || || |||||||||||||||| || | | || | | |||| | Sbjct 3841460 ACAGGTCCGAGGGAGTGACGTTCCACATGTCGTATTGAAGAATGCCCTGTGAGACGGGGC 3841519 Query 153268 TGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326 |||| | | || ||| | || | | | |||| | |||||||| || ||| Sbjct 3841520 TGCCCTCGTATGTTTCATAGGTTCCCTGCTCCTTGG-CGAGTTCGCAAGAGGCAGTGAGA 3841578 Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCC--GCTTCTTCGCTCT 153384 || ||| ||| |||||||| |||||| |||| || ||| || || | Sbjct 3841579 GCAGCATGGTAAATGGTTTCAAAGATTTGAATATTCAGTT--GCCTGGCCTCGGGAGAGT 3841636 Query 153385 CGTACGGCATGCGCAGCAGCACA-AAGGCGTCGGCCAGACCCTGGATACCGACGCCGATG 153443 | | || | ||||| |||| ||||| ||||| ||||| || | || | |||| Sbjct 3841637 CAAAGGGAAGACGCAG-AGCAAGGAAGGCATCGGCGAGACCTTGAACGCCCAGACCGACA 3841695 Query 153444 GGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATA 153503 || ||||| |||||| | | || | | |||||||| ||| |||||| Sbjct 3841696 GGCCGATGTCGGAAGTTGCTCTTCTTTGCTTCGGGAACGGGATAGTAGTTGATATCGATG 3841755 Query 153504 ATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAG 153563 || ||||| |||||||| ||||||| ||||| | | | ||| | || ||||| Sbjct 3841756 ATCTTGTTTAGGTTGCGAGTGACCACTTGAGTTACCTCATGAAGACGACCAAAGTCATAT 3841815 Query 153564 GTCATTTCGTCGACGCGT-----ACGCATCGATTCACGGCAATAGACGCCAGATTACAGA 153618 ||| | |||| || | ||| | | | || | || |||||||| || | Sbjct 3841816 -TCA---CCTCGA-GCCTGATCCACGAAGGTAGGGAGAGCGAGGGAGGCCAGATTGCACA 3841870 Query 153619 CGGCCGTCTCTTCGGCGTCGCTGTAC--TGCACGATCTCGGCGCAGAGGTTGCTGCATTT 153676 | || ||| || | |||||| | || ||||||| ||||||||| || | Sbjct 3841871 CAGCGACCTCGTCAGGA--GCTGTAAATTCGACAATCTCGGTGCAGAGGTTTGAGCTTCG 3841928 Query 153677 TATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTA 153736 ||| ||||| || | ||| ||||| || | |||||| ||||| ||| | |||||||| Sbjct 3841929 GATGGTACCCAAGTTCTTCTGGTTGCTCTTTCTATTGCAGGCGTCCTTGTAAAGCATGTA 3841988 Query 153737 CGGTCCGCCGGTCTCGACTTGCGTTTCGACGATA--AACCTATGCAGGTCCTGCGCTCGC 153794 || || |||||| || | |||| |||| | | || || | ||| || Sbjct 3841989 GGGGGTCCCAGTCTCGGTCTGTGCCTCGAGGATAGCATACCAT--AGCTTCTGGGCCTTA 3842046 Query 153795 ACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCG 153854 ||| ||| ||| || ||||| ||||||||| |||||||||| || || |||||| Sbjct 3842047 ACCGTCTGGCGACCACGTCCCTCCTTCTCGTATCTCTCGTACAGTTCCTTGAAGTCGTCG 3842106 Query 153855 CCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCG 153914 || ||| ||| || || || || || ||| || || | || | |||| | || Sbjct 3842107 CCATAGACGTCAGCTAGACCAGGGGCCTCATGAGGGCAGAAGAGTGTCCACTCTTGGTTC 3842166 Query 153915 GCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCC 153974 | ||| ||| |||||||| || || ||| || || || | | |||||| || Sbjct 3842167 TTCTCGACACGTTCCATGAACAAGTCAGGAGTCCACAGGGCATAGAACAAGTCGCGTGCT 3842226 Query 153975 TTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGC 154034 || || ||| ||| ||| | ||| || | | | | | ||| |||||| Sbjct 3842227 CTGACCTCTTCCTTGCCGTGGTTCTTTCGCAGGTTCAAGAAGTCGAAAACGTCTGCGTGC 3842286 Query 154035 CAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCGACGTGG 154091 || ||||| | ||||| ||| | ||||||| |||||| |||||||| ||||||| | Sbjct 3842287 CATGGTTCGAGGTAGATGGCAAAGGCACCTGGACGCTTGTTACCGCCCTGGTCGACGTAG 3842346 Query 154092 CGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTC 154151 || | |||||||||||||||| | |||||| || || | | |||||| |||||| Sbjct 3842347 CGAGCAGTATTGTTGAAGACGCGAAGCATGGGGATGAGACCATTGGAGGTGCCATTGGTC 3842406 Query 154152 GAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCG 154211 || | | || ||| || | ||| | || | |||||| || ||| | Sbjct 3842407 CCTGCAATATAGGATCCTGTGGCACGAATGCAATGGGCATTGAGGCCAATACCTCCGGCA 3842466 Query 154212 TACTTTGATATGGCAGCGC-AGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTC 154270 ||| || || || | |||| || || |||||||| |||||||| || || Sbjct 3842467 GTCTTGGAAATCATGGCACAAGTC-TTGAGAGTGTCATAGATGCCCTCGATGCTGTCTTC 3842525 Query 154271 GCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAG 154330 | | | | |||||| || || ||| || || | ||||| || || || Sbjct 3842526 TTTCATGTCTATCAAGAAGCAGGAGGACAGCTGAGGTTGAGGTGTTCCGGCATTGAACAG 3842585 Query 154331 GGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTC 154390 ||||| ||||| || || || ||| ||| | | ||| || || || || | Sbjct 3842586 CGTGGGTGAAGCGTGGGTGAAGCACTTCTGGGACATGAGGTTGTAGGTCTCAATAGCCTT 3842645 Query 154391 TTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTC 154450 ||| | || ||||| ||||| || | || || |||||||||||||| || |||||||| Sbjct 3842646 TTCAACGTCGTCGCCATGAATACCAACTGCCACACGCATGAGCATGTGTTGGGGACGTTC 3842705 Query 154451 GGCGACTCTATTGTCAATCTTCAAGAGATAT 154481 |||||| || ||||||| | ||| ||| Sbjct 3842706 TGCGACTTGCTTCCCAATCTTGAGGAGGTAT 3842736 >seq3 Length=8560927 Score = 114 bits (126), Expect = 1e-20 Identities = 166/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| ||||| ||||| || || |||| | |||||| || ||||||||||| Sbjct 4894867 GCCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGA 4894926 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || ||| || | || || |||| | |||| || |||||||||||||| || Sbjct 4894927 CAGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGG 4894986 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || ||||| ||||| ||| | || | || | ||| || | ||||| | |||| Sbjct 4894987 AATGCCTTCCTTGTC-CTGAATCTTGCTCTTGACGTTG-TCGATCGTGTCCGAGCTCTCC 4895044 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| | ||| | ||| || || |||| |||||| ||||| ||||||||| Sbjct 4895045 ACCTCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCATG 4895095 Score = 114 bits (126), Expect = 1e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||||| ||||| |||| Sbjct 4895357 GACTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCGGCCATCCTCGAGCTGTTTGCCGGCG 4895416 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || || ||||| ||||| ||||| || || |||||||| ||| || || | Sbjct 4895417 AAAATGAGGCGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCCTGGATCTTGGACTTGACG 4895476 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | ||||| ||||| | || | || || ||||||| ||||| Sbjct 4895477 TTGTCGATGGTGTCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTCAAGGTTTTC 4895536 Query 138601 ACAAAAATCTGCATGG 138616 || || |||||||||| Sbjct 4895537 ACGAAGATCTGCATGG 4895552 Score = 100 bits (110), Expect = 3e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || ||||| |||||| | ||| || ||||| | ||| || || | | Sbjct 4895129 GATTCCTTCTGGATGTTATAGTCGGAGAGAGTTCGGCCATCCTCCAATTGCTTGCCCGCA 4895188 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || |||||||||||||| || || ||||| ||||| ||| || || | Sbjct 4895189 AAGATCAGGCGCTGTTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGCTCTTGACG 4895248 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| |||||| || |||| ||| | ||| || || |||| ||||| Sbjct 4895249 TTGTCGATCGTGTCGGACGACTCAACTTCGAGCGTGATCGTCTTCCCCGTCAAGGTTTTC 4895308 Query 138601 ACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 4895309 ACGAAGATCTGCATG 4895323 >seq7 Length=2048283 Score = 87.8 bits (96), Expect = 2e-12 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| |||||| ||| || || || || |||| ||| Sbjct 22036 CCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCGTCTTCAAGCTGCTTGCCGGCGAAGA 21977 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | | ||||| ||||| || || || ||||| ||||| ||| || || | |||| Sbjct 21976 TCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTG- 21918 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | ||||||| |||||| ||||||| || | || || || || || || || || Sbjct 21917 TCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 21858 Query 138604 AA 138605 || Sbjct 21857 AA 21856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261878924480