Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cladophialophora_20bantiana_20[genbank_20GCA_5F900092765.1_202016- 09-07] 84 sequences; 37,087,895 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 5e-11 >seq3 Length=8560927 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 ||| || ||||| | || || || || || || || || || |||||||| || Sbjct 4894867 GCCGCCACGCAACCGCAAGACCAAGTGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGA 4894926 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | | ||||||| || || ||||| || | |||| ||||||||||| || Sbjct 4894927 CAGCGTCCGGCCGTCTTCCAACTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGGCGG 4894986 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||| ||||||||||| ||| ||||| || || | || || || || | || || Sbjct 4894987 AATGCCTTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATCGTGTCCGAGCTCTCCAC 4895046 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||||| || || || |||| |||||| ||||| || ||||| Sbjct 4895047 CTCCAGCGTAATCGTCTTTCCCGTCAAAGTTTTCACAAAGATCTGCAT 4895094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391634119940